Pteropus vampyrus (Indian flying fox): 120618272
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Entry
120618272 CDS
T07511
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgig04121
]
120618272 (PDZRN4)
Enzymes [BR:
pgig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120618272 (PDZRN4)
Ubiquitin system [BR:
pgig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
120618272 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-rbx1
PDZ_Tricorn
zf-RING_6
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120618272
NCBI-ProteinID:
XP_039738234
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MGFAQERFAEAVDPDFECKLCGQVLEEPLCTPCGHVFCASCLLPWAARRRRCPLQCQPLA
PGELYRVLPLRSLIHKLSIQCDYHARGCGRSVRLHELAAHVERCDFGPARCGRRGCVSGP
VRRGGGDVPARGGCGRAPGAGRGGGARGVLPGGCCGSGRGPGPRVLAWRRREKALLAQLW
ALQGEVQLTARRYQEKFTQYMAHVRNFARDLGGGHGPVRDHKPFTIVLERENDTLGFNII
GGRPNQNRQEETSTEGIYVSKILENGPADKADGLEIHDKIIEVNGKDLSKATHEEAVEAF
RNAKEPIVVQVLRRTPLSKPFYGTAPEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDI
CPFLLSDSCHSLHPMEHEFYEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVC
YRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECKRI
VLLVARPEIQLDEGWLEDERNEFLEDLNLEMLEEQHNEAMQRTANEVEQPKKQEEEEGTT
DTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNNTSLKSKRDLGQSHDTLGSVE
LQCNESFMSGEYIDSDCPGNQDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGGQ
EGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSIDMQRG
KLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRSTISAN
QPSSGQSGKESTSPKAKTTDQGCGIEGKEISESNKLSDQEKTGSEHIPYLSPYHSSSYRY
ANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRY
ITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRR
EFMMRSRLECLKESPQSGSEGKKELNIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKS
PDGTRVHNAFLSVTTV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgcccaggagcgcttcgccgaagccgtggacccggatttcgaatgcaaactg
tgcggccaggtgctggaggagcccctgtgcacgccgtgcgggcacgtcttctgcgccagc
tgcctgctgccctgggcggcgcggcggcgccggtgcccgctgcagtgccagcccctggcg
ccgggcgaactgtaccgggtgctgcctctgcgcagcctcatccacaaactgagcatccag
tgcgattaccacgcccgcggctgtggccgctcggtccggctgcacgagctggcggcgcac
gtcgaacgttgcgacttcggcccagcccgctgcggccgccggggctgcgtctcggggccg
gtccgccgcggcggcggggacgtgcctgcgcgggggggctgcgggagggcgcccggggcc
ggccgaggcgggggcgcgcgcggggtgctgccgggcggctgctgcgggagcgggcgggga
cccgggcctcgagtcctcgcctggaggcggcgcgagaaggcgctgctggcgcagctctgg
gcgctgcagggcgaggtgcagctcacggcccgcaggtaccaggagaagttcacccagtac
atggctcacgtccgcaacttcgccagggacctgggcggcggccacggcccggttagagac
cataagccattcaccattgtgttagaaagagaaaatgacactttgggattcaatattata
ggaggtcgaccaaatcagaatcgtcaggaagaaacatcaacagaaggaatttatgtttca
aaaattttggaaaatggacctgctgacaaagcagatggcctggagattcatgacaaaatc
atcgaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtggaagctttt
cgaaatgccaaggagcccattgtggttcaggtgctaaggcgaacgcctcttagtaaacca
ttctacggaacggccccagaagtgcagctcatgaacgccagcacacagacagacatcact
ttcgaacacatcatggccctggccaagctgaggccacctacgcctccagtgccagacatc
tgtccatttctgctctcagacagctgccattctcttcatccgatggagcatgaattttat
gaggacaatgagtatctttccagcttgcctgctgatgcagacagaacagaggactttgaa
tatgaggaggtcgagttgtgtcgtgttagcagtcaagagaagctgggcctgacagtctgt
taccgaacggatgatgaagaagacaccggcatttatgtcagcgaggtagatccaaatagc
atcgctgccaaagatggccgaattcgagaaggggatcgtattttgcaaataaatggagag
gatgtccagaatcgagaagaagcggtggcattactctctagtgatgagtgcaagagaatc
gtgctgcttgttgcaaggccagagattcagctggatgaaggctggctggaagatgaaagg
aatgaattcttagaggacttaaacttagagatgttggaagaacagcataatgaagcaatg
cagcgcactgccaatgaggtggagcagccgaaaaaacaagaagaagaagaaggcacaaca
gacacggccacatcttcatcaaacaaccacgagaaggacagtggagtggggcgcacagat
gaaagtttgcggaatgacgagagctcagagcaggagaatgcagctgaagatcccaacaac
acatctttgaagagcaagagagacctggggcagagccacgatactctagggagtgttgaa
cttcagtgcaacgagagcttcatgtccggtgaatacattgactcagactgccctggcaac
caggatgaggagtgtgaacgattccggcagctcttggagctcaaatgcaagattcgaaac
catggagagtatgacctgtattactcgagcagcacaatagaatgcaatcaaggcggacaa
gagggagtggagcatgagctacaattgcttaatgaagaactaagaaacattgaactcgaa
tgccagaatatcatgcaggctcacaggctccagaaagtgacagaccagtatggagacatc
tgggcattgcatgatggaggattccgaaattataacaccagcattgatatgcaaagggga
aaactagatgacatcatcgaacacccagaaaagtcagacaaggacagttcgagtgcttac
aacacagccgaaagctgcagaagcactccactcactgtggatcgttcacctgacagttcc
cttccaagagtgatcaacctcaccaataagaaaaacctgagaagcacaatttcagccaat
cagccctcttctggacagagcggtaaagagtcaacctcccccaaagccaaaaccactgac
caaggttgtggcatcgaaggcaaggagatttcagaaagcaacaaactttctgatcaagag
aagacaggcagcgaacacatcccttacctctctccttaccacagctcctcatatagatat
gcaaacatcccagcacatgcccggcattatcaaagctacatgcagttaattcaacagaaa
tctgcggtagaatatgctcagagtcagctcagtttggtgagcatgtgcaaggagtctcag
aagtgttcagagcccaagatggaatggaaggtgaaaattaggagcgatgggacccgctac
ataacaaagagaccagtgcgagaccggattctgaaggaacgtgccttaaagattaaggag
gaacggagtggcatgacgacagacgatgacaccatgagcgagatgaaaatggggcgctac
tggagcaaagaggagagaaagcaacacctggttcgggccaaagagcaacgtcggcgcaga
gagttcatgatgcggagccggttagagtgtctcaaggagagtcctcagagtggcagcgag
ggcaagaaggagctcaacatcattgaactcagccacaaaaagatgatgaaaaaaagaaac
aagaaaattttggacaactggatgacaatccaagaactgatgacccacggggccaagtct
cctgatggcacacgagttcataatgcctttttgtcagtcaccactgtatga
DBGET
integrated database retrieval system
