Pteropus vampyrus (Indian flying fox): 120618914
Help
Entry
120618914 CDS
T07511
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120618914 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgig01007
]
120618914 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgig03016
]
120618914 (VARS1)
Enzymes [BR:
pgig01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
120618914 (VARS1)
Amino acid related enzymes [BR:
pgig01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120618914 (VARS1)
Transfer RNA biogenesis [BR:
pgig03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120618914 (VARS1)
Prokaryotic type
120618914 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
tRNA-synt_1e
Arc1p_N_like
Jag_N
Motif
Other DBs
NCBI-GeneID:
120618914
NCBI-ProteinID:
XP_039738932
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALG
LRSSVQDPQAALGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPSA
RRIWGNVTRWFITCVQQPEFRAVLGEVVLYSGARHLSQQPGPEVTAPPKTAGQLKKEAKK
REKLQKFQQKQKIQQQQPPLGEQKKPKSEKREKRDPGVITYDLPTPPGEKKDVSGTMPDS
YSPQYVEAAWYPWWEQQGFFKPEYGRSSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGRNRHELGREAFLREVWKW
KEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVIEAFVQLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSESNEEVVVATTRIE
TMLGDVAVAVHPKDPRYQHLKGKSVIHPFLSRSLPIIFDDFVDMEFGTGAVKITPAHDQN
DYEVGQRHGLEAISIMDSRGALINVPLPFLGLPRFEARKAVLAALKEQGLFRGIEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPETHQRTWHAWMDNIRDW
CISRQLWWGHRIPAYFITVNDPTIPPGEDPDGRYWVSGRSEAEAREKAAKEFGVSPDKII
LQQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLK
LTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEV
EKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKGFVPSATSEPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAITTAQYSFWL
YELCDVYLECLKPVLNGVDQAATECACQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRM
PQAPPSLCVTPYPEPSECSWKDTEAEAAIELALSITRAVRSLRADYNLIRIRPDCFLEVA
DEATGALASAVSGYVQVLASAGVVAVLALGAPAPQGCAMALASDRCSVHLQLQGLVDPAR
ELGKLQAKRGEAQRQAQRLRERRSTMSYPVKVPLKVQEADEAKLRQTEAELRKMDEAITL
FQKMV
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcaccccgatgccttccccagcctccgagccctcata
gctgcgcgctacggggaggctggggaggggccggggtggggaggggcccacccccgcatc
tgtctccagccgcctccgacgagcaggactccctttcccccaccacgtctgcccgccctg
gagcaggggcccggtgggctctgggtgtggggggctacagctgtggcccagctgctgtgg
ccagcaggtctggggggccctgggggcagccgggcagctgtcctcgtccaacagtgggtt
agttacgcagacacggagctaataccagctgcctgtggggcaacgctgcccgccttggga
ctccgcagctctgtccaggacccccaggctgcactgggggccctgggaagagctctgagc
cccttggaagagtggcttcggctacacacctacctggctggggaggcccccactctggct
gacctggcggctgtcacagctttgctgctgcctttccgatatgtcctggacccctctgcc
cgccggatctggggtaatgtcactcgctggtttatcacatgtgtccagcagccagaattc
cgggctgtactgggagaggtggttctgtactcaggggccaggcatctttcccaacagcca
ggccctgaggtcactgcacccccaaagacagccggccaactcaagaaagaagcaaagaaa
cgggagaagctacagaaatttcaacagaagcagaagatccaacagcagcagccaccccta
ggggagcagaagaaaccaaaatcagagaagagggagaaacgggatcctggagtcattacc
tatgaccttccaaccccacctggggaaaagaaagatgtcagtggcaccatgcctgactcc
tatagccctcagtatgtggaggcggcctggtacccttggtgggagcagcagggtttcttc
aagccagagtatggacgttccagcgtgtcagcaccaaatccccggggcatcttcatgatg
tgcatcccaccccccaatgtgacaggctccctgcacctgggccatgcgctcaccaacgcc
atccaggactccctgacccgatggcaccgcatgcgtggcgagacgaccctgtggaaccct
ggctgtgaccatgcgggcattgccacccaggtggtggtggagaagaagctgtggcgagag
cagggccgaaatcggcatgaattgggccgtgaggcctttctacgggaggtctggaagtgg
aaggaggaaaaaggtgaccggatttaccaccagttgaagaagctcggcagttccttggac
tgggatagagcctgtttcaccatggaccctaaattgtcagcagctgtgatagaggccttt
gtccagcttcatgaggaaggagtcatctaccgcagtacccgccttgtcaactggtcctgc
actctcaactctgccatctccgatattgaggtggataagaaggagctgacaggtcgcacc
ctgctctctgtgcctggctacaaggagaaggtggagtttggggtcctcgtttcttttgcc
tacaaggtccaaggctcagagagcaatgaggaggtggtggtggcaacaacacggatcgag
acaatgctgggagatgtggccgtagctgtacaccccaaagatcccagataccagcacctg
aaggggaagagcgtgatccacccattcctgtctcggagcctccccatcatctttgatgat
ttcgtggacatggagtttggcacaggtgcggtgaagatcacccctgcacatgaccagaat
gactatgaggttgggcagaggcatgggctggaggccatcagcatcatggactcccgaggg
gccctcatcaatgtgcccttgcctttcctgggcctacccaggtttgaggccaggaaggca
gtgttggcggcactgaaggagcagggactgttccgtggtattgaggacaaccccatggtg
gtgccactttgcaaccggtccaaggacgtggtagagcctctactgcggccacagtggtat
gtgcgctgtggggagatggcccaggccgccagtgctgctgtgactcggggcgaccttcga
atcctgcctgagacccatcagcggacttggcatgcctggatggacaacatccgggactgg
tgcatctcccggcagctgtggtggggccatcgcatcccagcctactttatcactgtcaac
gacccaaccatacccccaggggaggaccccgatgggcggtactgggtgagtgggcgcagt
gaggccgaggcccgtgagaaggcagccaaggaatttggagtgtcccctgacaagatcatt
ctccagcaagatgaagatgtattggatacctggttctcctctggcctcttccccttctcc
atcctgggctggcccaaccagtcagaagacctgagtgtgttctacccggggacgctgctg
gagacgggccatgacatcctcttcttttgggtggccaggatggtcatgcttggcctgaag
ctcactggcaggctgcccttcagagaggtctaccttcatgccatcgtgcgagatgcccat
ggccggaaaatgagcaagtctctgggcaatgtcattgaccctctggatgttatccacgga
gtctccctgcagggcctccacgaccagttactgaacagtaacctggatcccagcgaggtg
gagaaggctaaagaagggcagaaggcggacttcccggcagggattcccgagtgtggcact
gatgccctccggtttggactgtgcgcctacacgtcccagggtcgtgacatcaacctggat
gtgaaccggatactgggataccgccacttctgcaacaagctttggaatgccaccaagttt
gccctccgtggtctggggaagggttttgtgccctcagccacctccgagcctggaggccat
gagagcctggtagaccgctggatccgcagtcggctgactgaggccgtgaggctcagcaac
caaggtttccaggcctacgacttcccagctatcaccaccgcccagtacagcttctggctg
tatgaactctgtgatgtctacctggagtgcctgaagcccgtgctgaatggggtggaccag
gcagccacagagtgcgcctgccagaccctctatacctgtctggatgttggcctgcggctg
ctctcacctttcatgccatttgtgaccgaggagctattccagaggctgccccggcggatg
ccacaagcaccccctagcctctgtgtcaccccctacccagagccttcggagtgctcctgg
aaggacactgaggcagaagctgccattgagctggccctgagcatcacgcgagccgtgcgt
tccctgcgtgctgactacaacctcatccggatccgacccgactgtttcctggaagtggct
gacgaggccacaggtgccctggcatcagcagtgtcaggctacgtgcaggtgctggccagc
gcaggtgtggtagctgtcctggccctgggggctcccgcaccccagggctgtgctatggcc
ctggcctctgaccgctgctccgtccacctgcagctgcaggggctggtggacccggcccgg
gagctaggcaagctgcaggccaaacgtggtgaggcgcagcggcaggcccagcgtctgcgg
gaacgccgctccaccatgagctacccagtcaaggtgcccctcaaagtccaggaggcagat
gaagccaagctccgacaaacagaagcagagctcaggaagatggacgaggctatcaccctt
tttcagaagatggtgtga
DBGET
integrated database retrieval system
