Pteropus vampyrus (Indian flying fox): 120620900
Help
Entry
120620900 CDS
T07511
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120620900 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgig03400
]
120620900 (LIG3)
Enzymes [BR:
pgig01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
120620900 (LIG3)
DNA repair and recombination proteins [BR:
pgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
120620900 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
120620900
NCBI-ProteinID:
XP_039741902
UniProt:
A0A6P3RHT3
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MTLAFKILFPSTLRALSRKELCLFREEHLWPNIKHFSQWSETDRLHGPCLLRKRKPVLSF
QEGSLRLRATCLVLLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCIFEKLERARATTKKIEDLTELEGWEELEDNEKEQINQ
HITDLSSKTASTPKKKAVVQAKLTATGQVTSPVKGASFVTSTNTRKFSGFSAMPNNSGEA
RSSPTPRRSLSSSKCDPKHKDCLLRVFRKLCATVAENPSYNMKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKEPGQRRSLSVQASLMT
PVQPMLAEACKSIEYAIRKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVA
HFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKVSDLVDMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKA
AVWEITGAEFSKSEAHTADGISIRFPRCTRIRHDKDWKSATNLPKLKELYQLSKERADFT
VVAGDEGSSTTGGSSGENEGTSKPSVSRKTRTSPKHPSASAKKAEGNLSSPNSKGGHKLT
AKPSPVKVGEKLVTKSSVKVGVKRKAPDETPCQAKVLLDIFTGVRLYLPPSTPDFSRLRR
YFVAFNGDLVQEFDMASATHVLGSRDKNLEAQQVSSEWIWACIRKRRLVAPC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagattctcttcccatcaaccctccgtgcactcagccgaaaagaa
ttgtgcctattccgagaagaacatctttggccaaacataaaacatttcagccagtggtca
gaaacagatcggcttcatgggccctgcctactccggaaaagaaagcctgttctgtcattc
caggaaggcagtctaagactacgtgccacctgccttgtcttattgccagggtcgcatgtg
ggactctgcagtgggccctgtgagatggctgagcaacggttctgtgttgactatgccaag
cgtggcacagccggctgcaaaaaatgcaaggaaaagattgtaaagggtgtgtgccgaatc
ggcaaagtggtacctaatcctttctcagagtccgggggtgatatgaaagagtggtaccac
attaaatgcatatttgagaaactggagcgggcccgggccaccacaaaaaaaatcgaggac
ctcacagagctggaaggctgggaagagctggaagataatgagaaagaacagataaaccag
cacattacagatctatcttctaagacagcaagcacaccaaagaagaaagctgttgtccag
gctaagctgacagctactggccaggtgacatctccagtgaaaggtgcctcatttgttacc
agtaccaatacccggaaattttctggcttttcagccatgcccaacaactctggggaagcc
cgctcaagccctacccctagaagaagtctttcctcaagcaaatgtgaccctaagcacaag
gattgtctgctacgtgtgtttcggaagttgtgtgccacagtggctgaaaatcctagctac
aacatgaaaactcagatcatccaggacttccttcggaaaggctcagcaggagatggtttc
cacggtgatgtgtacctaacagtgaagctgcttctaccaggtgttattaagagtgtttac
aacttgaatgataagcagatcgtgaagctttttagccgcatttttaactgcaacccagat
gatatggcacgggacctagagcagggtgacgtgtcagagacgatcagagtcttctttgag
cagagcaagtctttccccccagctgccaagagcctcctcaccatccaggaggtggacgaa
ttcctcctgcggctctccaagctcaccaaggaggatgagcaacaacaggccctgcaggac
atcgcctccaggtgtacagccaatgacctcaagtgcatcatcaggttgattaaacatgat
ctgaagatgaactcaggtgcaaaacatgtgttagacgcccttgaccccaatgcctatgaa
gccttcaaagcctcgcgcaacctgcaggatgtggttgagcgggtccttcacaatgagcag
gaggtggagaaggagccaggccagagacgatctctaagtgtgcaggcctcactgatgacc
ccagtgcagcccatgctggccgaggcctgcaagtccatagagtatgcgataaggaagtgt
cctaatggcatgttctctgagatcaagtatgatggggagcgagtccaggtgcataagaat
ggggaccacttcagctacttcagccgcagtctcaagcctgtcttacctcacaaggtggcc
cactttaaggactacatcccccaggctttccctgggggccacagcatgatcttggattct
gaggtgctcctgattgacaacaagacaggcaaaccactgccttttgggactttgggagtg
cacaagaaagctgccttccaggatgctaatgtctgcctgtttgttttcgattgtatctac
ttcaatgatgtcagtttgatggacaggcctctgtgtgagcggcggaagtttcttcatgat
aatatggttgaaattcccaatcggatcatgttctcagagatgaagcaagtgacgaaagtc
tcagacttggttgacatgataaaccgggtgatcagagagggattggaagggctggtgctg
aaagacgtgaagggtacatatgagcctggaaagcggcattggctgaaagtgaagaaagac
tatttgaatgagggggcaatggctgacacagctgacctggtggtccttggggccttctat
gggcaagggagcaaaggtggtatgatgtccatcttcctcatgggctgctacgatccaagc
agccagaagtggtgcacagtcaccaagtgttcaggtggccatgatgatgcaacactggcc
cgcctgcagaaggagctggacatggtgaaaatcagcaaggatcccagcaagatacctagc
tggctgaaaatcaacaagatctactatcctgactttatcgtcccagacccaaagaaagct
gccgtgtgggagatcacaggagctgaattctccaaatctgaggctcacacagctgatggg
atctctatccgattccctcgctgcacccgaatccgtcatgataaggattggaaatctgcc
actaacctccccaagctcaaggaactgtaccagctatccaaggagagggcagacttcacc
gtggtggctggagatgaggggagctccactacagggggcagcagcggagagaatgagggc
acctcaaagccttctgtgtctcgcaaaaccagaacctcccccaagcatccttctgccagt
gccaagaaggcagaaggaaatctgagtagccctaacagcaaaggtggccacaagctgact
gcaaagccttctcctgtgaaggtgggagagaagctggtcacaaagtcttctgtgaaagtt
ggggtgaagcggaaggctcctgacgagaccccatgccaagcaaaggtgctactagacatc
ttcactggggtgcggctctacctgccgccctccacaccagacttcagccgtctcagacgc
tacttcgtggcattcaatggagacttggtacaggaatttgacatggcctcagctacacat
gtgctgggtagcagggacaagaatcttgaggcccaacaggtctcctccgagtggatttgg
gcatgtatccggaaacggagactggtagctccctgctag
DBGET
integrated database retrieval system
