Pteropus vampyrus (Indian flying fox): 120621039
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Entry
120621039 CDS
T07511
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120621039 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120621039 (PRPF8)
Spliceosome [BR:
pgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120621039 (PRPF8)
Complex C
U5 SnRNP specific factors
120621039 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
120621039
NCBI-ProteinID:
XP_039742215
UniProt:
A0A6P3Q512
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagccccg
ctgccggactacatgtcggaggagaagctgcaggagaaagcccgaaaatggcagcagttg
caggccaagcgctatgcggaaaagcggaagtttggatttgtggatgctcagaaggaagac
atgcccccagaacatgttaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtctacttgggtgccctaaagtatatgccccatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtacctgtgctgtac
cacatcaccggagctatttcctttgtcaatgagattccctgggtcattgagcctgtctac
atctcccagtggggatcaatgtggattatgatgcggcgagaaaaaagagataggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccgcctttggactatgctgat
aacatcctagatgttgagccactggaggccattcagctagagctggaccctgaggaggat
gctcctgtgttggactggttctatgaccaccagccattgagggacagcagaaagtacgtg
aatggctccacttaccagcgctggcagttcacattgcccatgatgtccacactctaccgc
ctagccaatcagctcctgacagacttggtggatgacaactacttctatctgtttgatctg
aaggccttctttacttctaaggcgctcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagatatcaacctacaagatgaagactggaatgaattcaatgatattaac
aagatcatcattcggcagcctatccgcactgaatacaagattgcttttccttacttgtat
aacaaccttccacaccacgtgcaccttacctggtaccacactcctaatgttgtattcatc
aaaactgaggatcctgatttgccagctttctactttgatcctttgatcaacccaatttcc
cataggcactctgtcaagagccaggaaccattgccagatgatgatgaagagtttgagctc
ccagagtttgtggagcccttcctgaaggacacacccctttacacagataatacagcaaat
ggcattgccctgctgtgggccccacggcccttcaacttacgctctggtcgcacccgccgg
gccctggacatcccccttgtcaagaactggtatcgggagcactgtcctgctggacagcct
gtgaaagtgagggtctcctaccagaagctgcttaagtactatgtgcttaatgccctgaag
caccggccccctaaagcccaaaagaagaggtatctgttccgctccttcaaagccaccaaa
ttctttcagtccacaaagctggactgggtggaggtgggattacaggtttgccgccagggc
tacaacatgcttaaccttctcattcaccgtaaaaacctcaactatctgcacctggattat
aacttcaacctcaagcctgtcaagacacttaccaccaaggaaagaaagaaatctcgtttt
gggaatgctttccatctgtgtcgagaagttctgcgtttaacgaagctggtggtggacagt
catgtgcagtaccgattaggcaatgtggatgccttccagctggcagatggattgcaatat
atctttgcccatgtggggcagctgacaggcatgtaccggtacaaatacaagctaatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggccct
gtagggaagggccctggctgtggcttctgggctgctggctggagagtatggctgtttttc
atgcgtggcatcacccctttgctggagcgatggctgggcaacctcttggcccggcagttt
gaaggccgacactcgaagggggtggcgaagaccgtaacaaagcaacgagtagagtcacat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgagggg
atcaaacagaacaaggcccggacaatcttgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtccctgggctgccaacgcccatagagaatatgatcctt
cgatatgtaaaggccaaggctgactggtggaccaacactgcccactacaaccgagaacgg
atccgccgtggggccactgtggacaagactgtttgcaaaaagaacctgggccgcctcacc
cggctctacttgaaggcagaacaggagcggcagcacaactacctgaaggatgggccttac
atcacagcagaggaagcggtggcagtgtataccaccactgtgcattggttggaaagccgt
aggttctcacccattccattccccccgctctcctacaagcatgacaccaagttgcttatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtcccag
agagaggagctaggcctgattgagcaagcctatgacaacccccacgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtaggcattgagttcatggat
ctctacagccacctggtgccagtgtatgatgtggagccactagagaagataactgatgcc
tacttggaccagtacctgtggtatgaagctgacaagcgacgccttttcccaccctggatc
aagcctgctgacacagaaccacctcctctgcttgtttataagtggtgccaaggcatcaat
aacctacaggacgtgtgggagacaagtgagggcgaatgcaatgttatgctggagtcacgt
tttgagaagatgtatgaaaagatcgacttgaccctgcttaataggctgctgcgactcatt
gtagaccataacatagctgactacatgacagccaagaacaatgttgtcatcaactataag
gacatgaaccatacaaattcatatgggatcatcagaggcctgcagtttgcctcattcatc
gtgcaatactatggcctggtgatggatttgcttgtgttgggattacaccgagcaagtgag
atggctgggccgcctcagatgccaaatgactttctcagtttccaggacatagccaccgaa
gctgcccaccccattcgtctcttctgcagatacattgatcgcatccatattttcttcagg
ttcacagcagatgaggctcgagacctgatccagcgttacctgacagagcaccctgacccc
aacaatgaaaacatcgttggctataataacaagaaatgctggcccagagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacggtcagtgactacagttcagtgggagaacagcttcgtgtctgtgtacagtaag
gacaaccctaatctgctgttcaacatgtgtggctttgagtgtcgtatcttgcctaaatgc
cgcaccagctatgaggagttcacccacaaggatggagtctggaacctacagaatgaggtt
actaaggaacggacagcccagtgttttctgcgtgtggatgatgagtcaatgcagcgtttc
cataaccgcgtgcgtcaaattctgatggcctctggttccaccaccttcaccaagattgtg
aataagtggaacacagctcttattggccttatgacatactttcgggaggctgtggtgaac
acccaggagctcctggacttgctggtgaagtgtgagaacaagatccagacacgtatcaag
attggcctcaactccaagatgccaagtcggttcccccctgttgtgttctatacccctaag
gagttgggtggactcggcatgctctcaatgggccatgtgcttatccctcagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtaccgctacatacagccatgggagagtgagttcatt
gattctcagcgagtctgggccgagtatgcactcaagagacaagaggccattgctcagaac
agacgactgaccttagaagatctagaagattcatgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcacacactggcttatgataagggctggcgtgttcgaact
gactttaagcagtaccaggttttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctaaacaattaccgtacagacatgatccaggccctgggtggt
gtggaaggcatcctggagcacacactcttcaaaggcacttactttcctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcaccctctggtggtcccca
accatcaaccgagccaatgtatatgtaggatttcaggtgcagctggatctgacaggtatc
ttcatgcatggcaagatccccacactgaagatctctctcatccagattttccgagctcac
ttgtggcagaagatccatgagagtattgttatggatttgtgtcaggtgtttgaccaggaa
ctagatgcactagaaattgaaacagtacaaaaggagacaattcacccccgaaagtcctat
aagatgaactcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtttcc
cgaccctcattgctggcagactccaaggatgtgatggacagcaccaccactcagaagtat
tggattgacatccagttgcgctggggggactatgattcccatgacattgagcgctatgcc
cgggccaagttcttggactataccacagacaacatgagtatctacccttcacccacaggt
gtgctcattgccattgacctggcctataacctgcacagtgcctatggaaactggttccca
ggtagcaagcctcttatacagcaggctatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacgcatccgcaaggggctgcagctgtattcatctgagcccactgag
ccctatctgtcctctcagaactatggtgagctcttctccaaccagattatctggtttgtg
gatgacactaatgtctacagagtgactattcacaagacctttgaagggaacttgacaacc
aagcccatcaatggggccatcttcatcttcaacccacgcacagggcagctgtttctcaaa
ataatccatacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag
acagctgaggaggtggctgccctgatccggtctctgcctgtggaggagcagcccaagcag
atcattgtcactaggaagggcatgctggatccattggaggtacacttgctggacttcccc
aatatcgtgatcaaaggatcagagcttcaactccctttccaggcttgtctcaaggtggaa
aagtttggggacctcatccttaaagccactgagccccagatggttctctttaacctttat
gatgactggctcaagactatctcatcttacacggctttctcccgcctcattttaattctg
cgtgccctgcatgtgaacaatgaccgggcaaaggtgatcctgaagccagataagactact
attacagaaccacaccacatctggcccactctgactgacgaggaatggatcaaggtggag
gtgcaactcaaggatcttatcttggctgactatggcaagaaaaacaatgtgaatgtggca
tcactgacacagtcagaaattcgagacatcatcctgggtatggagatctcggcaccttca
cagcagcggcagcaaatagctgaaattgagaagcagaccaaggaacagtcacagctgact
gcaacacagactcgtactgtcaataagcatggcgatgagatcatcacctctaccaccagc
aactatgagacccagactttctcgtctaagactgaatggagggtcagggccatctctgct
gccaacctgcacctaaggaccaatcatatctatgtttcatccgatgatatcaaggagact
ggttatacctatatccttcccaagaatgtgcttaagaagttcatctgcatatctgacctt
cgagcccaaattgcaggatacctgtatggggtgagcccaccggataacccccaggtaaag
gaaatccgctgcattgtgatggtaccacagtggggcacccaccagactgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgagtccccacagttatcgccccaggatgttaccacccatgctaaaatcatg
gctgacaacccatcatgggatggtgagaagaccatcatcatcacctgcagcttcacacca
ggctcctgcacactgacagcctacaagctgacccccagcggctatgaatggggccgtcag
aacacggacaagggcaacaacccaaaggggtatctaccctcgcactacgagagggtccag
atgctactgtcagaccgcttccttggcttctttatggtccctgcccagtcctcatggaac
tacaactttatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaac
cccaaagaattctaccacgaggtgcatagaccctcgcatttcctcaactttgccctcctg
caggagggtgaggtctactctgcggaccgagaggacctctatgcctag
DBGET
integrated database retrieval system
