Pteropus vampyrus (Indian flying fox): 120621046
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Entry
120621046 CDS
T07511
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03030
DNA replication
pgig03420
Nucleotide excision repair
pgig03430
Mismatch repair
pgig03440
Homologous recombination
pgig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120621046 (RPA1)
03420 Nucleotide excision repair
120621046 (RPA1)
03430 Mismatch repair
120621046 (RPA1)
03440 Homologous recombination
120621046 (RPA1)
03460 Fanconi anemia pathway
120621046 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgig03000
]
120621046 (RPA1)
03032 DNA replication proteins [BR:
pgig03032
]
120621046 (RPA1)
03400 DNA repair and recombination proteins [BR:
pgig03400
]
120621046 (RPA1)
Transcription factors [BR:
pgig03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120621046 (RPA1)
DNA replication proteins [BR:
pgig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120621046 (RPA1)
DNA repair and recombination proteins [BR:
pgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120621046 (RPA1)
MMR (mismatch excision repair)
120621046 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
120621046 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Ubiquitin_At1g33420
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
120621046
NCBI-ProteinID:
XP_039742234
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVVHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNTLVEDEQLSSNCICQINRFIVNTLKDGRRVIILMELSILKSAEAVGLKIGNPVPYNE
GHGQQQVVPSPVSAASPPTSRPQQQNGSSGVGSTVSKAYGASKTFGRAGGTSLVNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVIPCEDGHHLPTVQF
DFTGIGDLESKSKDSLVDIIGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVSATL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSILSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGIAGSNTNWKTLYEAKSENLGQGDKADYFSSVATVVYLRKENSMYQA
CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYVGELKEKNEQAFEEIFQNANFRSFIFKIRVKLETFNDESRIKAVVMDVKPVDFR
EYGRRLIMNIRKNALI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtggtccacctgagcgaaggggccattgcggccataatgcaacagggagatacatcc
ataaaacccatcctccaagttattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatgggttgaacaccctatcctctttcatgttggcaaca
cagttgaacactcttgttgaagacgaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacacactgaaagatggaaggagagtaattattttaatggagttaagc
attttgaaatcagctgaagcagttggattaaagattggcaatccagtgccctataatgaa
ggacatggacaacagcaggtagttccttctccagtctcagctgccagtccaccaaccagc
aggccccagcaacagaatgggagctcaggagtgggttccactgtatctaaggcttatgga
gcctcaaagacatttggaagagctggaggtaccagcctagtgaacagttctggaggaaca
caagccaaagtagtacctattgccagcctcaccccttaccaatccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattctcgaggggaagggaag
cttttctctatagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttctttccccttattgatgtgaacaaggtctattatttctctaaaggt
actctgaagattgctaacaaacaattcacagctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtcataccctgtgaagatggtcatcatttacccacagttcagttt
gatttcacggggatcggtgacctagagagcaaatctaaggattcacttgtagacataatt
gggatctgcaagagctatgaagatgccactaaaatcacggtgaagtctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtcagggaaagtggtatctgcaactctg
tggggagaagatgctgataaatttgatggttctagacaacctgtgatggctatcaaagga
gccagggtttctgattttggtggacggagcctgtctatactgtcttcaagcacaatcatt
gtgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctcggatctaaagagtggaggaatagcagggagcaacacc
aactggaaaactttgtatgaggctaaatcagagaacctgggccaaggcgacaaggcagac
tattttagctctgtggcaacagtggtgtatcttcgcaaagagaactctatgtatcaggcc
tgcccaactcaggactgcaataagaaagtgattgatcaacagaatggattgtaccgctgt
gagaagtgtgaccgtgaatttccaaatttcaagtaccgcatgatcctgtcagtaaatatt
gccgattttcaagaaaatcagtgggtgacttgtttccaggaatctgcagaggctatcctc
ggacaaagcactgcttatgttggggagttaaaagagaagaatgaacaggcatttgaagaa
attttccagaatgccaactttcgatctttcatattcaagatcagggtcaaactagagacc
ttcaatgatgagtctcgaattaaggccgttgtgatggatgtgaagcctgtggacttcaga
gaatatggcagaaggctgatcatgaacataaggaaaaatgcactaatatga
DBGET
integrated database retrieval system
