Pteropus vampyrus (Indian flying fox): 120621666
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Entry
120621666 CDS
T07511
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig01524
Platinum drug resistance
pgig03430
Mismatch repair
pgig05200
Pathways in cancer
pgig05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120621666 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120621666 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
120621666 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
120621666 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgig03400
]
120621666 (MSH2)
DNA repair and recombination proteins [BR:
pgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120621666 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
120621666
NCBI-ProteinID:
XP_039743156
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MAVQPKETLQLESAAEFGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYIGPAALNQKVAALQMLLDKYNLPCTVTQCVMQTPWRDIVSWKDNLGGWTLTCSN
GGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLS
QFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQKKLGLCEFPDNDQFSNLEA
LLIQIGPKECVLPAGETTGDVGKLRQVIQRGGILITERKRADFSTKDVYQDLNRLLKGKK
GEQVNSVVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRA
LNLFQGSVEDTSGSQSLTALLNKCKTPQGQRLVNQWIKQPLMDKSRIEERLNLVEAFVED
AELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVISALGKYEGKHQ
TLLLAVFVTPFVDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMDDLE
KKMQSTLISTARDLGLDSGKQIKLDSNSQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGV
KFTNSTLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFA
HVSNGAPIPYVRPVILEKGQGRIKLKASRHACVEVQDEVAFIPNDVHFEKDKQMFHIITG
PNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEM
LETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTA
LANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKAL
ELEEFQNIGESQENDEMEPAAKRCYLEREQGEKIIQEFLCKVKQMPFTEMSEENITIKLK
QLKAEVIAKNNRFVNEIISRIKVTT
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggcagagtttggctttgtg
cgcttctttcagggaatgccggagaagccgaccactacggtgcgcctcttcgaccggggg
gacttctacacggcgcaccgcgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtagtcaagtacattgggccggcagctcttaaccagaaagtagctgcacttcag
atgctccttgataaatataacttaccatgcacagtcacccaatgtgtcatgcaaactcct
tggagagacatagtatcttggaaggataaccttggaggttggacacttacctgtagtaat
ggaggagcaaagactctagagagtgttgtgcttagtaaaatgaattttgagtcttttgta
aaagatcttcttctagttcgtcagtatagagttgaagtttataagaatagagctggaaat
aaggcctccaaggagaatgattggtatttggcatttaaggcttctccaggtaatctttct
cagtttgaagacattctctttggtaataatgatatgtcagcttccattggtgttgtgggt
gtaaaaatgtcaacagttgatggtcaaagacaggttggagttgggtatgttgactccata
cagaagaagctaggactatgtgagttccctgataatgatcagttctccaatctggaggct
cttctgattcagattggaccaaaggaatgtgttttaccagcgggagagactactggagac
gtgggaaaactgaggcaggttattcaaagaggaggaattcttatcacagaaagaaaaaga
gctgacttttccacaaaagatgtttatcaggacctcaaccggttgttgaaaggcaaaaaa
ggagaacaggtgaatagtgttgtcttgccggaaatggagaatcaggttgcagtttcatca
ttgtctgcagtaatcaagtttttagaactcttatcagatgattcaaactttggacagttt
gaattgactacttttgacttcagccagtacatgaaattggatattgcagcagtcagagcc
cttaaccttttccagggttctgttgaagataccagtggatctcagtctctgactgcattg
ctgaataaatgcaaaacccctcagggacaaagactggttaaccagtggattaagcagcct
ctcatggataagagcagaatagaagagagactgaatttagtggaagcttttgtagaagat
gcagaattgaggcagactttacaagaagatttactgcgtcgattcccagatcttaaccga
cttgccaagaaatttcaaagacaagcagcaaacttacaagattgttaccgactatatcag
ggcataaaccaactccctagtgttataagtgctctgggaaaatacgaaggaaaacatcag
acgttgttgttggcagtttttgtgactccttttgttgatcttcgttctgatttctccaag
tttcaggaaatgatagaaacaactttagatatggatcaggtggaaaaccatgaattcctt
gtaaaaccttcatttgatcctaatctgagtgaattaagagaaataatggatgatttagaa
aagaagatgcaatcaacattaataagtacagcaagagatctaggcttggattctggcaaa
cagattaaattggattccaactcacagtttggatattactttcgtgtaacgtgtaaggaa
gaaaaagtccttcgtaacaataaaaacttcagtacagttgatattcagaagaatggtgtt
aaatttaccaatagtacattaacttctctcaatgaagagtataccaaaaataaaactgag
tacgaggaagcccaggatgccattgttaaagaaattgtcaatatttcttcaggctatgta
gaaccaatgcagacactcaatgatgtgttagctcagctagatgctgtcgtcagctttgcc
catgtgtcaaatggagcacctattccatatgtacgaccggtcattttggagaaagggcaa
ggaagaattaagttgaaagcatccagacatgcttgtgttgaagttcaagatgaagttgca
tttattcctaatgatgttcactttgaaaaagataaacagatgttccacatcattactggc
cccaatatgggaggtaaatcaacatatattcgccaaactggggtgatagttctcatggcc
caaattgggtgttttgtgccatgtgagtcagcagaagtgtccattgtggactgtatcttg
gcccgggtaggggctggtgacagtcaattgaaaggagtctccacctttatggctgaaatg
ttagaaactgcttctattctcagatctgcgactaaagattctttaataatcattgacgaa
ttgggaaggggaacctctacctatgatggattcgggttggcatgggctatatcagagtac
attgcaacaaaaatcggtgctttttgcatgtttgcaactcattttcatgaacttactgcc
ttggcaaatcagataccaactgttaataatctacatgtcacagcactaactacagaagag
accttaactatgctttatcaggtgaagaaaggtgtctgtgatcagagttttgggattcac
gttgcagagcttgctaatttccctaggcatgtaatagagtgtgctaaacaaaaagccctg
gaactagaagagtttcagaatattggagagtcacaagaaaatgatgaaatggaaccagca
gcaaagaggtgctatctggaaagagagcaaggtgagaaaattattcaagaatttttatgc
aaggtgaagcaaatgcccttcactgaaatgtcagaagaaaacatcacaataaagttaaaa
cagctgaaagctgaggtgatagcaaagaataataggtttgtaaatgaaatcatttcacga
ataaaggttactacgtga
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