Pteropus vampyrus (Indian flying fox): 120621920
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Entry
120621920 CDS
T07511
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig04512
ECM-receptor interaction
pgig04514
Cell adhesion molecule (CAM) interaction
pgig04820
Cytoskeleton in muscle cells
pgig05144
Malaria
pgig05205
Proteoglycans in cancer
pgig05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120621920 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
120621920 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120621920 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
120621920 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
120621920 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
120621920 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgig04131
]
120621920 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgig04090
]
120621920 (SDC1)
00535 Proteoglycans [BR:
pgig00535
]
120621920 (SDC1)
Membrane trafficking [BR:
pgig04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120621920 (SDC1)
CD molecules [BR:
pgig04090
]
Proteins
120621920 (SDC1)
Proteoglycans [BR:
pgig00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
120621920 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
120621920
NCBI-ProteinID:
XP_039743718
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MRRAALWLWLCALALRLQPALPQIVATNMPPEDQDGSGDDSDIFSGSGAGGLQDITLSHQ
TSTWKDTGLLTVMPTAAEPTNTDGIAASTSILPAREVPEEGEGVLLAEVEPGFTTLEKET
THPPSETTLHPATHRASTARATASQAPVTSHSHRAVQPDLHETSPPVGPGHPDPHTPNME
DRGPSATERAAEDGVVTEFPAGEGSGEQDFTFDVSGESTVGAAMEFDQQNEPRDGHGATG
ASQGLLERKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQK
PSKQEEFYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggcc
ctcccgcaaattgtggccacgaacatgccccctgaagatcaggatggctctggggatgac
tccgacatcttctctggctcaggcgcaggtggtctgcaagatatcaccttatcacatcag
acctccacctggaaggacacagggctcctgacggtcatgcccacagctgcagagcccacc
aacactgatggcatcgctgcctccacctccatcttgccggctagagaggtgcctgaggag
ggagagggggtgttactggcagaggtggagcctggctttaccaccctggagaaggagacc
acccacccacccagtgagaccacgctgcacccagccacccaccgagcatcaacagcaaga
gccaccgcctcccaggcacctgtcacctcccattcccacagggccgttcagcctgacctc
catgagacctcacctccggtaggacccggccatcccgaccctcacactcccaacatggag
gacagaggtccttctgccactgagagggctgccgaggatggagttgtcactgagttccca
gcaggagagggctctggggagcaggacttcacctttgatgtgtccggagagagcacagtt
ggggctgctatggaatttgaccagcagaacgagccccgagatggtcatggggccactggc
gcctcccagggcctcctggaaaggaaggaagtgctgggaggggtcattgccggaggcctc
gtggggctcatctttgctgtgtgcctggtgggcttcatgctgtaccggatgaagaagaag
gacgagggcagctactccttggaggagccaaaacaagccaacggcggggcctaccagaag
cccagcaagcaggaagagttctacgcctga
DBGET
integrated database retrieval system