KEGG   Pteropus vampyrus (Indian flying fox): 120621920
Entry
120621920         CDS       T07511                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
pgig  Pteropus vampyrus (Indian flying fox)
Pathway
pgig04512  ECM-receptor interaction
pgig04514  Cell adhesion molecule (CAM) interaction
pgig04820  Cytoskeleton in muscle cells
pgig05144  Malaria
pgig05205  Proteoglycans in cancer
pgig05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pgig00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120621920 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    120621920 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120621920 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    120621920 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    120621920 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    120621920 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pgig04131]
    120621920 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pgig04090]
    120621920 (SDC1)
   00535 Proteoglycans [BR:pgig00535]
    120621920 (SDC1)
Membrane trafficking [BR:pgig04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    120621920 (SDC1)
CD molecules [BR:pgig04090]
 Proteins
  120621920 (SDC1)
Proteoglycans [BR:pgig00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   120621920 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 120621920
NCBI-ProteinID: XP_039743718
LinkDB
Position
Unknown
AA seq 309 aa
MRRAALWLWLCALALRLQPALPQIVATNMPPEDQDGSGDDSDIFSGSGAGGLQDITLSHQ
TSTWKDTGLLTVMPTAAEPTNTDGIAASTSILPAREVPEEGEGVLLAEVEPGFTTLEKET
THPPSETTLHPATHRASTARATASQAPVTSHSHRAVQPDLHETSPPVGPGHPDPHTPNME
DRGPSATERAAEDGVVTEFPAGEGSGEQDFTFDVSGESTVGAAMEFDQQNEPRDGHGATG
ASQGLLERKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQK
PSKQEEFYA
NT seq 930 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggcc
ctcccgcaaattgtggccacgaacatgccccctgaagatcaggatggctctggggatgac
tccgacatcttctctggctcaggcgcaggtggtctgcaagatatcaccttatcacatcag
acctccacctggaaggacacagggctcctgacggtcatgcccacagctgcagagcccacc
aacactgatggcatcgctgcctccacctccatcttgccggctagagaggtgcctgaggag
ggagagggggtgttactggcagaggtggagcctggctttaccaccctggagaaggagacc
acccacccacccagtgagaccacgctgcacccagccacccaccgagcatcaacagcaaga
gccaccgcctcccaggcacctgtcacctcccattcccacagggccgttcagcctgacctc
catgagacctcacctccggtaggacccggccatcccgaccctcacactcccaacatggag
gacagaggtccttctgccactgagagggctgccgaggatggagttgtcactgagttccca
gcaggagagggctctggggagcaggacttcacctttgatgtgtccggagagagcacagtt
ggggctgctatggaatttgaccagcagaacgagccccgagatggtcatggggccactggc
gcctcccagggcctcctggaaaggaaggaagtgctgggaggggtcattgccggaggcctc
gtggggctcatctttgctgtgtgcctggtgggcttcatgctgtaccggatgaagaagaag
gacgagggcagctactccttggaggagccaaaacaagccaacggcggggcctaccagaag
cccagcaagcaggaagagttctacgcctga

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