Pteropus vampyrus (Indian flying fox): 120621946
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Entry
120621946 CDS
T07511
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120621946 (DDX1)
03016 Transfer RNA biogenesis [BR:
pgig03016
]
120621946 (DDX1)
Enzymes [BR:
pgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120621946 (DDX1)
Spliceosome [BR:
pgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120621946 (DDX1)
Transfer RNA biogenesis [BR:
pgig03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
120621946 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
120621946
NCBI-ProteinID:
XP_039743751
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHIKFSKNGKDLGLAFEIPSHIKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDSYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIENPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaagaaatg
gattggcttctcccgactgatatccaggctgaatctatcccactgatcctgggaggaggt
gatgtacttatggcggcagaaacaggaagcggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaaatggcaaatgaatccatatgatagaggatct
gcttttgcaattgggtcagatggtctttgctgtcaaagcagagaagtaaaggaatggcat
ggatgtagagctactaaaggattaacgaaaggaaaacactactatgaagtgtcctgtcac
gaccagggcttgtgcagagttggatggtcttccatgcaggcctccttggacttgggtact
gacaagtttggattcggctttggtggaacaggaaaaaaatctcataataaacaatttgat
aattacggagaggaattcactatgcacgataccattggatgttacctagatatagataaa
gggcatatcaagttctctaaaaatggaaaagacctgggtctggcttttgaaataccatca
cacataaagaaccaagccctctttcctgcctgcgttttgaagaatgctgaattaaaattt
aacttcggtgaagaagaatttaagtttccacccaaagatggctttgttgctctatccaag
gcaccggatagttatgttgtcaagtcacagcacacaggtaatgcacaggtggcacagacc
aagtttctccccaatgcgcccaaagctctcatcgttgaaccctcccgagagttagcagaa
caaactttgaataatgtcaagcagtttaagaaatacattgagaatcctaaattaagggag
cttctgataattggaggtgttgcagcacgggaccagctctctgttttagataatggggtg
gacatagtcgtgggcactccgggaagactggatgacttggtgtcgacggggaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tctgattttataaataggattcacaatcagattcctcagattacctccgatggaaaaagg
cttcaggtgattgtttgctctgctactttgcattctttcgatgtcaagaaactgtctgag
aagataatgcattttcccacgtgggttgatttgaaaggagaagattccgttccagacacg
gtacaccatgtggttgtccccgtgaatccgaaaactgacaggctctgggaaaggcttgga
aaaaaccacattagaactgatgaagtacacgccaaagataacacaaggcctggcgctaac
agtccagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggcc
atcaaggagcacaagatggatcaagcaattattttctgtagaaccaaaatcgactgtgac
aacttggagcagtattttatgcagcaaggaggaggacctgataaaaaaggacaccagttc
tcgtgtgtttgccttcatggtgacagaaagcctcatgagagaaagcaaaacttggaaaga
tttaagaaaggagacgtaaggttcttgatttgcacagatgtggctgccaggggaattgat
attcacggtgttccttatgttataaatgtcaccctgcctgatgaaaagcaaaactatgta
catcgaattggcagagtaggaagagctgaaagaatgggtctggctatttccttggtggca
acagagaaagaaaaggtttggtaccatgtatgtagcagccgtggaaaagggtgttataac
acgaggctcaaggaggatggtggctgtaccatatggtacaacgagatgcaattgctctct
gagatagaagaacacctgaactgtaccatttctcaggttgagccagatataaaggtcccg
gttgatgaatttgatggcaaagtcacctatggtcaaaagagggccgctggtggtggaaac
tataaaggccatgtggatattttggcacctacagttcaagagttggctgccctggaaaag
gaggcacagacatcttttctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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