Pteropus vampyrus (Indian flying fox): 120622060
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Entry
120622060 CDS
T07511
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120622060 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgig03021
]
120622060 (CPSF3)
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120622060 (CPSF3)
Transcription machinery [BR:
pgig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120622060 (CPSF3)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120622060 (CPSF3)
U7-dependent histone pre-mRNA processing factors
120622060 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
120622060
NCBI-ProteinID:
XP_039744019
UniProt:
A0A6P3QNH7
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSSLSVTVDGKTANINLETRAVECEEGSE
DDESLREMVELAAQRLYEALTPAR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgcagaggagagtgaccagctgctgatccgaccccttggagctggg
caagaagttggaagatcatgtattattctggagttcaaaggaagaaaaataatgttggac
tgtgggatccaccctggcctggaaggaatggatgctcttccttatattgatttaattgac
ccagctgaaattgatcttttactaattagtcatttccatttggatcactgtggagctttg
ccctggttcctccagaagacaagtttcaaaggaagaacgttcatgactcatgccacaaaa
gctatttatagatggcttctttcagattatgtcaaagttagtaatatatcagcggatgac
atgctgtatactgagacagacttggaagagagcatggacaaaattgaaaccatcaatttc
catgaagttaaggaagttgcaggaatcaagttctggtgttaccacgcgggccacgttcta
ggagctgccatgttcatgatcgagatcgcaggcgtgaagcttttgtatacaggtgatttc
tcaagacaagaagatagacacttaatggcagctgaaattcctaatattaaacctgatatt
cttatcattgagtcaacctatgggacccacatccatgagaagcgtgaggagcgagaagcg
agattctgtaacacggttcacgatattgtaaacagagggggcagaggcctcattcccgtc
tttgctcttggaagggctcaggagctgctcttgatcttagatgagtactggcagaatcac
ccagaactccacgatattccgatatactatgcgtcgtctttggccaagaagtgtatggca
gtgtaccagacatatgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaaacatataagtaacctcaagagcatggatcattttgatgacatt
ggtcccagtgtcgtaatggcctccccaggcatgatgcaaagtggcttatccagagagctc
tttgaaagctggtgtactgacaagaggaatggtgtcattatagcagggtactgtgtagaa
gggacacttgccaagcatatcatgtctgaacccgaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtccgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
cagaatgaaatggccagattgaaagcagccctgattcgagaatatgaagataatgatgaa
gttcacatagaggttcacaatcctcggaatacagaagcagtgaccttgaacttcagagga
gaaaaattagccaaggtcatgggctttttagcagacaaaaaacccgaacaaggccagcgg
gtctcaggaatactcgttaaaagaaactttaactatcacatcctttctccttgtgacctc
tccaattatactgacttggccatgagcactgtaaaacaaacccaagccattccatataca
ggtccttttaatttgctctattaccagctacagaaattgacaggtgatgtagaagaatta
gaaattcaagaaaaacctgctttgaaagtgttcaaaaatattactgtaatacaggaacca
ggaatggtggtactagaatggttggcaaacccttccaacgacatgtacgcagataccgta
acaaccgtgatactagaagtccagtcaaacccgaaaataaggaaaggtgcagtacagaag
gtctctaaaaaattagaaatgcacgtttatagcaagaggttagagatcatgctgcaggac
atatttggagaagactgtgtaagtgtaaaagatgattctagtcttagtgtcacagtggat
ggaaaaaccgccaacataaacttggagacacgggccgtcgagtgtgaggaaggaagcgaa
gatgacgaatctctccgggaaatggtggagctggctgcgcagagactgtacgaggccctc
acgccagcccgctga
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integrated database retrieval system
