Pteropus giganteus (Indian flying fox): 120623003
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Entry
120623003 CDS
T07511
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pgig
Pteropus giganteus (Indian flying fox)
Pathway
pgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120623003 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120623003 (CNOT1)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120623003 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120623003 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
120623003
NCBI-ProteinID:
XP_039744785
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctccacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagccatagaggtc
ctacacctcctcctctcccatctcctttttgggcagaagggagcctttggagttggacag
gagcagatagacgctttccttaagacgctgcgcagagattttccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgattttatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcaattt
ggtgttcgggaagtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccattacagagtatctctgctcctggcagtgggatc
tggagtgatggaaaagataaaagtgatggagcacaggcacacacgtggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggtctgggaatggaagtgttcccagtagacctcatatatagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctactgaggctc
gcagaggtggggcaatatgagcaagtcaaacagctcttcagctttcctatcaaacactgt
ccagacatgttggtattggccttactacaaatcaacacctcctggcacaccttgcgccat
gaactcatctccactctgatgccaattttcctcggaaaccatcctaactctgctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaatccgccagcttatcatgcat
gcaatggcagagtggtacatgcgaggggagcagtatgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgcatgactttttta
aagagacggtgcccttctattttgggtggactcgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcgacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttgtcagaaaccatcctcaccatggtagccaattgcagtaatgtt
atgaataaggccagacaaccgccacctggagttatgccaaaaggacgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctctagctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttccaccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttctacccca
aatcaaacaactgcattcagtggtattggaggactttcatcacagctcccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaaccagcacttt
agtaaagaaatagacgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaactatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagagaacgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagagttacatataactgcctgcctgtttggtgggata
attgaaaaaggactggtcacttacatggcactaggtctggccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcagtttccacatcatttacaggagtatattgagtatggacagcagtctagagat
cctcctgtgaaaatgcagggctccatcacaacccccggaagtattgcactggctcaggct
caggctcaggcccaggttccagcaaaagcaccccttgctggtcaggttagcactatggta
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaactggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacattgcttgtg
gccacagatcaaactgaaagaattgtagagcccccagaaaatatccaggagaaaattgca
tttatcttcaacaatctctcacagtcgaatatgacacaaaaggttgaagaactcaaggaa
actgtgaaggaagaatttatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcttgtattcaaacttccttgacacgctgaagaatcctgaa
tttaataagatggttctaaatgagacctacagaaacatcaaagttctcctgacctctgat
aaagctgcagccaatttctcagatcgttctttgctgaagaacttgggacattggctggga
atgattacactagctaaaaataaacccatcttacatactgacttggatgtgaaatctttg
ctgctagaggcttatgttaaaggacagcaagaattgctctatgtagtgccctttgttgcc
aaagtcttagagtctagcattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacatgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcaactctctgctccaaag
aaagatgtcaaacagccagaagaactccctcccatcacaaccacaacaacttctacgaca
ccagctaccagtaccacctgtacagccacggttccaccacagccacagtacagctaccat
gacatcaatgtctattccctcgcaggcctggcaccacacattactctaaacccaacaatt
cccttgtttcaggcccatccgcagttgaagcagtgtgtacgtcaagcgattgaacgggct
gtccaggagttggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gagcaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggcatggctatgattacttgcagggaacct
ttgctcatgagcatatctacgaatctgaaaaacagttttgcctcagctcttcgtactgca
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcctgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaaatcagattgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagaatttgcacgcaatgtgcct
ggcttcttgcctactaatgatttaagtcagcccacgggatttttagctcagcctatgaag
caagcttgggcaacagatgatgtagctcaaatttatgataagtgcattacagaactggag
cagcacctacatgccatcccaccaacattggccatgaaccctcaagctcaggctctgaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttactagatgccacaagtggtgctgatgctgatctg
ctgctgcgctatagggaatgccacctcttggtcttaaaagctcttcaagatggccgtgca
tatgggtctccgtggtgtaacaaacagatcacaaggtgcctaattgaatgtcgagatgaa
tataaatataatgtggaggcagtggagttgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgtggca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggcagatctgttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtatgatgatcctccaggcctgagggagaaagcagagtaccttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaagactgatgac
ctcataacaaggttctttcgtctgtgtactgaaatgtgtgttgaaatcagttaccgtgct
caggcagagcagcagcacaatcctgctgctaatcccaccatgatccgagccaagtgctat
cacaacctggatgcctttgttcgactcattgcactgctagtgaagcactcaggggaggcc
accaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctcctacaggatcatgatgttcggcaaagtgaatttcagcagcttccctaccatcgaata
tttatcatgctgctcttggaactcaatgcacctgagcatgtactagaaaccattaatttc
cagacacttacagctttctgcaatacattccacatcttgaggcctaccaaagctccaggc
tttgtgtatgcctggctcgaactgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcacagctactgattgatttattcaaa
tatttagcacctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctgctggttcttttgcatgatttccctgagttcctttgtgattac
cattatggattctgtgatgtgatcccacctaattgtatccagctaagaaatctgatactg
agtgccttcccaagaaacatgaggctcccagacccatttactcccaatctgaaggtggat
atgttgagtgaaattaatattgcgccccggattctcaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcgatcaccggtcacttttcta
tctgatctgcgcagcaacctacaggtgtccaatgagcctggcaatcgctacaacctccag
ctcatcaatgcactggtgctctatgtagggactcaggccattgcacacatccacaacaag
ggcagcacaccttcaatgagcacgatcacccactcggctcacatggacatattccagaac
ctggctgtggacttggacactgaaggccggtatctctttttgaatgcaattgcaaatcag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctgtatctctttgca
gaggccaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtcttcttattaccttcattgagctgattaaaaatcca
gcatttaagttctggaaccacgagtttgtacactgtgccccagaaattgaaaagttattc
cagtcggttgcacagtgctgcatgggacagaagcaggctcaacaagtaatggaagggacc
ggtgccagttag
DBGET
integrated database retrieval system
