Panacibacter ginsenosidivorans: FRZ67_01415
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Entry
FRZ67_01415 CDS
T06131
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin03030
DNA replication
pgin03430
Mismatch repair
pgin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRZ67_01415
03430 Mismatch repair
FRZ67_01415
03440 Homologous recombination
FRZ67_01415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgin03032
]
FRZ67_01415
03400 DNA repair and recombination proteins [BR:
pgin03400
]
FRZ67_01415
Enzymes [BR:
pgin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRZ67_01415
DNA replication proteins [BR:
pgin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FRZ67_01415
DNA repair and recombination proteins [BR:
pgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FRZ67_01415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DEDDh_C
DUF7508
GIY_YIG_2
SH3_retrovirus
Motif
Other DBs
NCBI-ProteinID:
QEC66027
UniProt:
A0A5B8V3D0
LinkDB
All DBs
Position
complement(354420..355754)
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AA seq
444 aa
AA seq
DB search
MYAIVDIETTGSHPQGNGITEIAIVLHDGEQVEGRFSTLVNPGYQIPPYVVQLTGITNAM
TATAPSFTEVAHKVYNLLNNRIFVAHNVNFDYSFIKYHLRSAGYDWTPRKLCTLKLSRKA
FPGMVKYGLGHICRALDIVVENRHRAGGDADATAILFSKIIQKGGDKIIKEFLKKENREQ
ILPPNLPAEQVNNLPYTPGVYYFHDAKDKVIYVGKAKVLKNRVVSHFTGLSTGKRRQEFL
LNIHRVSFQETPTEFTAFILESIEIKRLWPKHNQSQKHFEHKYGIYAFDDSRGYKRLAID
KKRRHFEPLLSFNQFMDAHRMLWKIVREHELHPSLCFLDRTMISDDHFPEKELYNERVNN
ALQNIQSQLSTYAILEPAAFGKENVCVLVEKGMFYGMGTIPDNMNFTNIEKLKKKVIQYP
ENEAIRSMIRSYALKHPAKVYSMD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaattgtagatatagaaaccacaggcagtcatccccagggcaatggcattact
gaaattgctattgtgctgcatgatggtgagcaggtagaagggcggttttctacgttggta
aatccgggctaccagatacctccatatgttgtgcaattaaccggcattaccaatgccatg
actgcaacagcgccttcttttacggaagtagcgcacaaagtttacaacctgcttaataac
cgcatttttgtagcgcacaatgtaaacttcgattactcctttataaaatatcatctgcgt
agcgcaggctacgattggacgccaagaaagttatgtacactaaagcttagccgcaaagca
tttcccggcatggttaaatatggcttgggacatatttgtcgtgcattagatatagttgta
gaaaacaggcatagagcaggtggtgatgcagatgctacagcaattttgtttagtaaaata
atacagaagggtggcgataaaatcatcaaagaatttctgaagaaggaaaaccgtgaacaa
atattaccgccaaatctccctgcagagcaagtaaataatttgccatatacgcctggtgta
tattattttcatgatgcaaaggataaagtgatttacgtagggaaagcaaaagtgctaaag
aaccgtgtggtgagccattttacaggattgagtacggggaaaagaagacaagagttttta
ttgaatattcaccgtgtttctttccaggaaacgccaacagaattcactgcttttatttta
gagagcattgagataaaaagattgtggccaaaacataatcaaagccagaaacactttgaa
cataagtatggcatttatgcttttgatgattcaagaggttataaacggttggcaatagat
aaaaagcgcaggcattttgagccgctattatcattcaaccaatttatggatgctcataga
atgttatggaagattgtgagggaacatgagttgcacccaagcctgtgctttttagacagg
acaatgatcagtgatgatcattttccggaaaaggaattatataatgagagagtaaataat
gcattgcagaatatacaatcgcaattaagtacttatgcaatacttgaacccgcagcattt
ggaaaagaaaatgtatgtgtattggtagaaaaaggcatgttttatggtatgggcaccatt
cctgacaacatgaattttacaaacatcgaaaaattaaagaagaaggttatccaatatccg
gaaaacgaagccatccgttctatgataagaagttatgctttgaaacatcctgctaaagtg
tattcgatggattga
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