KEGG   Panacibacter ginsenosidivorans: FRZ67_02275
Entry
FRZ67_02275       CDS       T06131                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pgin  Panacibacter ginsenosidivorans
Pathway
pgin00010  Glycolysis / Gluconeogenesis
pgin00020  Citrate cycle (TCA cycle)
pgin00260  Glycine, serine and threonine metabolism
pgin00280  Valine, leucine and isoleucine degradation
pgin00310  Lysine degradation
pgin00380  Tryptophan metabolism
pgin00620  Pyruvate metabolism
pgin00630  Glyoxylate and dicarboxylate metabolism
pgin00640  Propanoate metabolism
pgin00670  One carbon pool by folate
pgin00785  Lipoic acid metabolism
pgin01100  Metabolic pathways
pgin01110  Biosynthesis of secondary metabolites
pgin01120  Microbial metabolism in diverse environments
pgin01200  Carbon metabolism
pgin01210  2-Oxocarboxylic acid metabolism
pgin01240  Biosynthesis of cofactors
Module
pgin_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pgin_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pgin_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pgin_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pgin00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FRZ67_02275 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FRZ67_02275 (lpdA)
   00620 Pyruvate metabolism
    FRZ67_02275 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FRZ67_02275 (lpdA)
   00640 Propanoate metabolism
    FRZ67_02275 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FRZ67_02275 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FRZ67_02275 (lpdA)
   00310 Lysine degradation
    FRZ67_02275 (lpdA)
   00380 Tryptophan metabolism
    FRZ67_02275 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FRZ67_02275 (lpdA)
   00670 One carbon pool by folate
    FRZ67_02275 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgin04147]
    FRZ67_02275 (lpdA)
Enzymes [BR:pgin01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FRZ67_02275 (lpdA)
Exosome [BR:pgin04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FRZ67_02275 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like FAD_binding_3 NAD_binding_8 DAO GIDA Lys_Orn_oxgnase 3HCDH_N Thi4 aRib 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: QEC66188
UniProt: A0A5B8V4T2
LinkDB
Position
574511..575920
AA seq 469 aa
MAYDVIVLGSGPGGYPAAIRASQLGFSVAIIEKESLGGICLNWGCIPTKALLKSAQVFEY
MKHSKDYGIISGDVQADFGGVIKRSRGVADKMSKGVQFLMKKNKIDVVMGYGKIKAKGQV
EVTAADGTKKIIEGKYIIIATGGRSRELPTLKQDGKKVIGYREAMVLPQQPKSMIIVGSG
AIGVEFGYFYSSLGTKVTIVEFMPRVVPVEDEDISKELEKQLKKQGIDIMTSASVESVDT
GGAGVKALVKKQDGSTVTLEADIVLSAVGVVANIENIGLEETGVKTDKGRITTDKYFQTN
VPGIFAIGDCTPNQALAHKASKEGINAAEYIGYLEKKFHHQPEPIDYGNVPGCTYCSPEI
ASVGMTEKAAKEAGYEIKVGKFPFMASGKASASGATEGFVKVIYDAKYGEFLGCHMIGNN
VTEMIAEAVTARRLETTAHEILNAIHPHPTMSEGLKEATAAAYGEAIDI
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggcatacgacgttattgtgcttggcagcggtcctggtggatatcctgccgctatacgt
gcatctcagttaggattttcagtggcaattattgaaaaggaaagccttggtggtatatgt
ttgaattggggctgtattccaaccaaagcacttctaaaaagtgcacaggttttcgaatac
atgaaacacagtaaagactatggtattatttccggcgatgtgcaggcagactttggcggc
gttataaaaagaagccgtggagttgccgataagatgagtaaaggcgtacagttcctgatg
aagaaaaacaagatagatgtggtgatgggatatggcaaaataaaagccaagggacaggta
gaagtaaccgctgcagacgggactaaaaaaataattgaaggcaaatacatcatcattgca
acaggtggccgcagccgcgaactgcccacccttaaacaggatggcaaaaaagtaattggt
taccgcgaagcaatggtattgccgcagcagccaaaaagcatgatcattgtgggtagcggt
gcgataggtgtagagtttggttatttctatagcagccttggaacaaaagttactattgtg
gaatttatgccaagggttgtgcctgttgaagatgaagacatttcaaaagaactggaaaaa
caactaaagaaacaaggcattgacataatgaccagcgcttctgttgaaagtgttgataca
ggtggcgccggtgtaaaagcattggtaaaaaaacaagacggcagtactgtaacacttgaa
gcagatatagttttaagcgctgttggtgtggtagctaatattgaaaatattggccttgaa
gaaacaggtgtaaaaacagacaagggcagaataactactgataagtattttcaaacaaat
gtgcccggcatatttgccattggcgattgtacacctaaccaggcattggcacataaagcc
agcaaagaaggtattaacgctgctgaatatatcggctatcttgaaaagaaattccatcat
caaccagaacctattgattatggtaatgtaccaggatgcacctattgctctcctgaaatt
gccagtgtaggtatgacggagaaagcagcaaaggaagcaggctacgaaatcaaagtgggt
aagttcccgttcatggccagtggtaaagcaagtgcatcaggcgctactgaaggttttgta
aaagtaatttatgatgccaagtatggcgagttccttggttgccatatgatcggtaataat
gttactgaaatgatagccgaagcagttactgcacgcaggttagaaacaacagcacacgaa
atattaaatgccattcacccgcacccaaccatgagcgaaggtttaaaagaggctacagca
gcagcttatggagaagcaatagacatttaa

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