Panacibacter ginsenosidivorans: FRZ67_02275
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Entry
FRZ67_02275 CDS
T06131
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00010
Glycolysis / Gluconeogenesis
pgin00020
Citrate cycle (TCA cycle)
pgin00260
Glycine, serine and threonine metabolism
pgin00280
Valine, leucine and isoleucine degradation
pgin00310
Lysine degradation
pgin00380
Tryptophan metabolism
pgin00620
Pyruvate metabolism
pgin00630
Glyoxylate and dicarboxylate metabolism
pgin00640
Propanoate metabolism
pgin00670
One carbon pool by folate
pgin00785
Lipoic acid metabolism
pgin01100
Metabolic pathways
pgin01110
Biosynthesis of secondary metabolites
pgin01120
Microbial metabolism in diverse environments
pgin01200
Carbon metabolism
pgin01210
2-Oxocarboxylic acid metabolism
pgin01240
Biosynthesis of cofactors
Module
pgin_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgin_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pgin_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pgin_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
FRZ67_02275 (lpdA)
00020 Citrate cycle (TCA cycle)
FRZ67_02275 (lpdA)
00620 Pyruvate metabolism
FRZ67_02275 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
FRZ67_02275 (lpdA)
00640 Propanoate metabolism
FRZ67_02275 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FRZ67_02275 (lpdA)
00280 Valine, leucine and isoleucine degradation
FRZ67_02275 (lpdA)
00310 Lysine degradation
FRZ67_02275 (lpdA)
00380 Tryptophan metabolism
FRZ67_02275 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FRZ67_02275 (lpdA)
00670 One carbon pool by folate
FRZ67_02275 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgin04147
]
FRZ67_02275 (lpdA)
Enzymes [BR:
pgin01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
FRZ67_02275 (lpdA)
Exosome [BR:
pgin04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
FRZ67_02275 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
NAD_binding_8
DAO
GIDA
Lys_Orn_oxgnase
3HCDH_N
Thi4
aRib
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
QEC66188
UniProt:
A0A5B8V4T2
LinkDB
All DBs
Position
574511..575920
Genome browser
AA seq
469 aa
AA seq
DB search
MAYDVIVLGSGPGGYPAAIRASQLGFSVAIIEKESLGGICLNWGCIPTKALLKSAQVFEY
MKHSKDYGIISGDVQADFGGVIKRSRGVADKMSKGVQFLMKKNKIDVVMGYGKIKAKGQV
EVTAADGTKKIIEGKYIIIATGGRSRELPTLKQDGKKVIGYREAMVLPQQPKSMIIVGSG
AIGVEFGYFYSSLGTKVTIVEFMPRVVPVEDEDISKELEKQLKKQGIDIMTSASVESVDT
GGAGVKALVKKQDGSTVTLEADIVLSAVGVVANIENIGLEETGVKTDKGRITTDKYFQTN
VPGIFAIGDCTPNQALAHKASKEGINAAEYIGYLEKKFHHQPEPIDYGNVPGCTYCSPEI
ASVGMTEKAAKEAGYEIKVGKFPFMASGKASASGATEGFVKVIYDAKYGEFLGCHMIGNN
VTEMIAEAVTARRLETTAHEILNAIHPHPTMSEGLKEATAAAYGEAIDI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgacgttattgtgcttggcagcggtcctggtggatatcctgccgctatacgt
gcatctcagttaggattttcagtggcaattattgaaaaggaaagccttggtggtatatgt
ttgaattggggctgtattccaaccaaagcacttctaaaaagtgcacaggttttcgaatac
atgaaacacagtaaagactatggtattatttccggcgatgtgcaggcagactttggcggc
gttataaaaagaagccgtggagttgccgataagatgagtaaaggcgtacagttcctgatg
aagaaaaacaagatagatgtggtgatgggatatggcaaaataaaagccaagggacaggta
gaagtaaccgctgcagacgggactaaaaaaataattgaaggcaaatacatcatcattgca
acaggtggccgcagccgcgaactgcccacccttaaacaggatggcaaaaaagtaattggt
taccgcgaagcaatggtattgccgcagcagccaaaaagcatgatcattgtgggtagcggt
gcgataggtgtagagtttggttatttctatagcagccttggaacaaaagttactattgtg
gaatttatgccaagggttgtgcctgttgaagatgaagacatttcaaaagaactggaaaaa
caactaaagaaacaaggcattgacataatgaccagcgcttctgttgaaagtgttgataca
ggtggcgccggtgtaaaagcattggtaaaaaaacaagacggcagtactgtaacacttgaa
gcagatatagttttaagcgctgttggtgtggtagctaatattgaaaatattggccttgaa
gaaacaggtgtaaaaacagacaagggcagaataactactgataagtattttcaaacaaat
gtgcccggcatatttgccattggcgattgtacacctaaccaggcattggcacataaagcc
agcaaagaaggtattaacgctgctgaatatatcggctatcttgaaaagaaattccatcat
caaccagaacctattgattatggtaatgtaccaggatgcacctattgctctcctgaaatt
gccagtgtaggtatgacggagaaagcagcaaaggaagcaggctacgaaatcaaagtgggt
aagttcccgttcatggccagtggtaaagcaagtgcatcaggcgctactgaaggttttgta
aaagtaatttatgatgccaagtatggcgagttccttggttgccatatgatcggtaataat
gttactgaaatgatagccgaagcagttactgcacgcaggttagaaacaacagcacacgaa
atattaaatgccattcacccgcacccaaccatgagcgaaggtttaaaagaggctacagca
gcagcttatggagaagcaatagacatttaa
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