Panacibacter ginsenosidivorans: FRZ67_03750
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Entry
FRZ67_03750 CDS
T06131
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgin03032
]
FRZ67_03750 (topA)
03400 DNA repair and recombination proteins [BR:
pgin03400
]
FRZ67_03750 (topA)
Enzymes [BR:
pgin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FRZ67_03750 (topA)
DNA replication proteins [BR:
pgin03032
]
Prokaryotic type
DNA Topoisomerases
FRZ67_03750 (topA)
DNA repair and recombination proteins [BR:
pgin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FRZ67_03750 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEC66448
UniProt:
A0A5B8V7U4
LinkDB
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Position
complement(898970..901570)
Genome browser
AA seq
866 aa
AA seq
DB search
MAKNLLIVESPAKAKTIEKILGSDFTVKSSYGHIRDLEKDEMGIDVNNNYQPRYKVPDDK
LKVVSELKQLSKKYDEVWLATDEDREGEAISWHLCEVLGLDPSSTKRIVFHEITKPAIKA
AVGNPRTVDMNLVNAQQARRVVDRIVGFELSPVLWRKMSMGTSLSAGRVQSVAVRLIAER
EREINAFTATSSFKIEASFAANDIAGRNVTFKAEAARQPNAENAEAFLKSCIGAKYTVKD
IQVKPAKKSPAAPFTTSTLQQEASRKLGYGVSRTMLLAQKLYESGHITYMRTDSVSLSTT
AMEAAKAQVTNMYGERYAQTRKYKNKNESAQEAHEAIRPTYMENTSVPDEELRRLYELIW
KRTMASQMADAELEKTIAKIDVSTNKAELTAQGEVLKFDGFLKVYMEDRDDDDVTEEEGG
EGVLPPLRVGQQLDFREMKAIERFTRPAPRYTEASLVKKLEELGIGRPSTYAPTISTILK
RGYVEKRDKEGVKRNFQVLVLASDHISKEIQQETTGAEKSKLFPTDLGLVVTDFLNQYFN
DVMDYGFTAKIEEEFDEIADGKKLWTKMVDGFYKPFKKDIENTLENAERIKGERELGTDA
ESGKKVVARMGRFGPMVQIGDAGDEEKPRFAKLKPTQSIETITYDEAMELFKLPLTLGEH
EGKEVSVNAGRYGPYVKWGEDFISLPRTEDPATVDLNRAIELITDKQTADAPIAMYEDKP
VTKGKGRFGPFIKWNDLFINIPRAYNFDRLTQKDCEELIEKKLEKESNRYIQQWPAEKIS
IENGRWGPFIRFGKKMLKITRKDDNEKYSTEELAAIPIDNVKKMIETQVPDAFVKKAAKK
TAAPKKAATKKSAPKKSAPKKSAKKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacttattgattgttgagtctcccgcaaaagcaaaaaccattgaaaaaata
ctcggtagcgacttcaccgtaaaaagcagttacggtcacattcgcgaccttgaaaaggat
gaaatgggtattgatgtaaataataattaccagccgcgttataaagttcctgatgataaa
ttaaaagtagtcagcgaattaaaacaactctccaaaaaatatgacgaggtttggctggca
acggatgaggaccgtgaaggcgaagccatcagctggcatttatgtgaagtgttgggtctg
gatccatcttcaacaaaacgtattgtgtttcatgagatcaccaaacctgctattaaagct
gctgtaggtaatccacgcactgttgatatgaatcttgtaaatgcacagcaggcaagacgt
gttgtagacaggatcgttggttttgaattaagtcctgtgctatggcgtaagatgagtatg
ggcacatcattaagtgcgggacgtgtacagagtgttgcagtaagactaattgctgaaaga
gaaagagagatcaacgcatttactgccacaagcagttttaaaattgaagcatcttttgca
gctaatgatattgcaggacgaaatgtaacattcaaagcagaagctgcaagacaaccaaat
gcagaaaatgctgaagcatttttgaagagttgtattggtgcaaaatatacggtgaaagat
atacaggtaaagcctgcgaaaaaatctcctgctgcgccgtttactacatctactttacaa
caggaagcaagccgcaaacttggttatggtgtaagcagaacaatgttgcttgcgcaaaaa
ttatatgaaagcggtcacattacttatatgcgtacagacagtgttagtttgagtaccact
gctatggaggctgcgaaagcacaggtaactaatatgtacggtgagcgatatgcacaaaca
cgtaagtataaaaataaaaatgaaagtgcacaggaagcgcatgaggctattcgtccaact
tatatggaaaacacaagcgttcctgatgaggaattgagacgtttgtatgaactgatctgg
aagagaacaatggcatcgcagatggctgatgcagagttggaaaaaacaattgcgaagatt
gacgtatctactaataaggctgaattaacagcacagggtgaagtattaaagtttgatggt
tttcttaaagtatatatggaagaccgcgatgatgatgatgttacagaagaagaaggtggg
gaaggtgtgttaccgccattgcgtgttggacaacaactggatttcagagaaatgaaagct
attgaacgctttacaagacctgcaccaagatatacagaggcttctcttgttaagaagctg
gaagagttaggtatcggtcgcccttctacttatgcgccaacaatctctactattcttaaa
cgaggctatgtagaaaaaagagataaggaaggcgtcaaaagaaatttccaggtgctggtg
ctggcaagtgatcatatttcaaaagagatacaacaggaaacaacaggtgcagaaaaatca
aaattatttccaacagatcttgggctggttgttacagattttcttaaccagtatttcaat
gatgtaatggattatggttttactgccaagatcgaagaagagtttgatgagattgccgat
ggcaaaaaactgtggacaaaaatggtggatggtttttataaaccatttaaaaaagatata
gagaatactttagaaaatgcagaacgtataaaaggtgaaagagaattaggcacagatgct
gaaagcggtaaaaaagttgtggcaagaatggggcgctttggtccaatggtgcaaataggc
gatgcgggtgatgaagagaagcctcgttttgcaaaactgaaaccaactcaaagtattgag
accattacttatgatgaagcaatggaactctttaaactgccgcttacgcttggtgagcat
gaaggcaaagaagtttctgtaaatgccggtcgttatggcccttatgtaaaatggggcgaa
gattttatttcgttgccaagaaccgaagaccctgcaacggttgatcttaacagggccata
gaactcattacagataagcaaacagccgatgcgcctattgctatgtatgaagataaacct
gtaacaaaaggcaaaggaagattcggaccatttataaaatggaacgatctttttattaat
attccaagggcttataattttgacaggcttacacaaaaagattgtgaagagctcatcgaa
aagaaactcgaaaaagaaagtaaccgctatatacagcagtggcctgcagaaaagatctcg
attgagaatggccgctggggcccattcatacgttttggaaaaaagatgttgaagatcacc
cgtaaagatgataatgaaaaatattcaacagaagaacttgcagcaattccgatagataat
gtaaagaagatgattgagacacaggtgcctgatgcatttgtaaaaaaggccgcaaagaaa
actgcagcgccaaagaaagcagctactaaaaaatcagctccaaaaaaatcagctccaaaa
aagtccgcgaagaaaaagtaa
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