Panacibacter ginsenosidivorans: FRZ67_04465
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Entry
FRZ67_04465 CDS
T06131
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgin03400
]
FRZ67_04465
Enzymes [BR:
pgin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FRZ67_04465
DNA repair and recombination proteins [BR:
pgin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FRZ67_04465
Prokaryotic type
FRZ67_04465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QEC66585
UniProt:
A0A5B8V663
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All DBs
Position
1066603..1067907
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AA seq
434 aa
AA seq
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MTVNIMWFRRDLRLHDNAALYHALKSEHPVIPVFIFDKNILDDLEEKKDRRVEFIREALL
EMQEILKKHNSSLEVYYDTPLDVYKKLVKKYTIKTVFANEDYEQYAMDRDDAINKLLNQH
NAELKTYKDHVILAKEEVLKDDGKPYTVFTPYSKKWKAILTGFHLKPYPTEKYSKNFFNS
EPHKIPSLESMGFIKVGEPFPPAAVRAEIIKHYKEQRNYPGIHGTTKLGVHLRFGTISIR
ELAGKVKKISETYLNELIWRDFYHMILWHFPHVRKEKAFKPEYDHIHWRNNEKEFNAWCN
GQTGYPIVDAGMRELNATGYMHNRVRMIVASFLTKHLLIDWRWGEAYFAKKLLDYDYAAN
NGGWQWAAGSGCDAAPYFRVFNPTLQTQKFDADLKYIRKWVPEFEGFDYVKPIVDQDMAR
KRAIEVYSNAVKKS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaaatatcatgtggttcaggagagatctgagattacacgacaatgcagcgtta
taccatgcattaaaaagtgaacatcctgttatacctgtttttatttttgataaaaacatc
ttagatgatcttgaagaaaagaaagacaggcgtgtagaattcattcgtgaagcattactg
gaaatgcaggaaattttaaagaagcataatagcagtcttgaagtttattatgatacgcca
cttgatgtttataaaaaactggtaaaaaaatataccattaaaactgtttttgccaatgaa
gattacgagcaatatgccatggaccgtgatgatgcaatcaataaattactaaaccaacac
aacgctgaattaaagacgtacaaagaccatgttatacttgccaaagaagaagtattaaaa
gatgatggcaaaccctatacagtgtttacaccttacagcaaaaaatggaaagctatactc
acgggctttcatctaaaaccttacccaacagaaaaatactctaagaatttctttaacagc
gagccacacaaaataccatctttagaaagtatgggttttataaaagtgggtgaaccattt
ccaccggcagcagtgcgtgccgaaataataaaacattataaagaacaaagaaattatccc
ggcatacacggcactaccaaactgggcgtgcatttaagatttggtaccattagcattcgt
gaacttgctggtaaagtaaaaaaaatcagtgagacttatttgaatgaacttatctggcgt
gatttttaccatatgatactttggcactttccacatgtgcgaaaagagaaagcattcaaa
ccggaatatgatcatatacattggcgcaataatgaaaaagaattcaacgcctggtgcaat
ggacaaacaggctatcctattgttgatgcaggcatgcgtgaactgaatgcaactggttat
atgcacaaccgtgtgcgcatgatcgttgcttcctttcttaccaaacatttactcatagac
tggcgctggggcgaagcttactttgcaaagaaattattagactatgattatgcagccaac
aatggtggctggcaatgggccgctggcagtggctgtgatgcagcgccatactttcgtgtg
tttaatcctacactacaaacacagaagtttgatgccgatttaaagtacattcgaaaatgg
gtgcccgagtttgaaggctttgattatgtaaagccaatcgtggatcaggatatggcaagg
aagagagctatagaagtgtatagcaatgccgtgaaaaaatcataa
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