Panacibacter ginsenosidivorans: FRZ67_06090
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Entry
FRZ67_06090 CDS
T06131
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgin03400
]
FRZ67_06090
Enzymes [BR:
pgin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
FRZ67_06090
DNA repair and recombination proteins [BR:
pgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
FRZ67_06090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
DUF6514
HipN
Motif
Other DBs
NCBI-ProteinID:
QEC66885
UniProt:
A0A5B8V6Y0
LinkDB
All DBs
Position
1468412..1469932
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AA seq
506 aa
AA seq
DB search
MIAAIVFPHQLFKQHPALDKANKVYLVEEWLFFKQYKFHKQKIVLHRASMQFYRSWLEEN
GYIVEYIESTNAHAEVRKLIAHLSKQGVTEIHNADVVDDWLRKRFQHACKKHAIETVEHE
TPMFLNTLNGVSKFFENRKTYFQTDFYIKQRKQRNILIEANNQPAGGKWSFDAENRLKFP
KNEKLPAYNFPKENKYVKEARSYVVKYFSHHYGLADAPFNTVNSFYPVTFTEAEKWLHGF
LLERLPNFGKYEDAMVANQSILYHSVLSPLLNIGLITPQQVIDETLKIYQRQKLPLNSVE
GFIRQIIGWRDFIRIVYEREGRKQRTTNYWGFTRKIPASFWKGETGIVPVDNVINHVLQN
AYSHHIERLMVLGNFMLLCEFDPNDVYKWFMEMYIDAYDWVMVPNVYGMTQFADGGLITT
KPYISGSNYILKMSDYKNAKAVNEHTWQEIWDGLFWRFMHVHSNYFQSNPRIGMLLKTFQ
KMPAEKRNQHLQVAEDFLQLLDARNK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcagcaatagtatttccgcaccagttattcaaacagcatccggcgttggacaaa
gcaaacaaagtttacctggttgaagaatggcttttttttaaacaatacaaatttcataaa
caaaagattgtgttgcacagggcaagcatgcaattctacagatcatggctagaagaaaat
ggatatatagttgaatacatagagagtacaaatgcacacgcagaagtaagaaaacttatt
gcacatctttcaaaacagggagtaacagaaattcataatgcagatgtggttgatgactgg
ttaagaaaaagatttcaacatgcatgtaagaaacatgcaatagaaaccgtggaacatgaa
acacccatgtttctcaatacgcttaacggcgtaagtaagttctttgaaaacaggaaaaca
tattttcaaacagatttttatattaagcaacgcaaacaacgaaacattttgattgaagca
aacaatcagcctgctggcggtaagtggagttttgatgcagagaatcgtttaaagttccca
aaaaatgaaaagcttcctgcatacaattttccaaaagaaaacaagtatgtaaaagaggcg
agaagttatgttgtaaaatatttcagtcaccattatggcttagcggatgcaccttttaat
acggtaaacagtttttatcctgtaacatttacagaggctgaaaaatggttgcacggtttt
ttgttagagcgtttaccaaactttggaaagtatgaagatgcgatggttgcaaaccaaagt
attttataccacagtgtgctttcgccgttgttaaatattggcttgatcactccacagcag
gtaatagatgaaacattgaaaatttatcagcggcaaaagttaccgttgaattctgtggaa
ggttttataaggcaaattattggctggcgcgactttatacgcatcgtgtatgaacgcgaa
ggaagaaaacaacgcaccacaaattattggggctttacaagaaaaattcctgcatcattc
tggaaaggtgaaacaggtattgtgccggttgataatgttataaatcatgtgttgcaaaat
gcgtactcacatcatatagagcgattgatggtgctcggaaattttatgctgctctgtgag
tttgacccaaatgatgtttacaagtggttcatggaaatgtacattgatgcatacgattgg
gtgatggtgccaaatgtgtatggaatgacgcagttcgcagatggcggtcttataaccaca
aagccttacatcagcggaagcaattacattttaaaaatgagcgactataaaaatgcaaaa
gctgtcaacgagcatacatggcaggaaatatgggatggtttattctggcgtttcatgcat
gtgcacagcaattattttcaaagcaatccgcgcattggcatgctgttaaagaccttccaa
aaaatgcccgcagaaaagcgcaatcaacatctgcaggttgcagaagattttttgcaactg
ctggatgcccggaataaataa
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