Panacibacter ginsenosidivorans: FRZ67_07185
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Entry
FRZ67_07185 CDS
T06131
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgin03019
]
FRZ67_07185
03009 Ribosome biogenesis [BR:
pgin03009
]
FRZ67_07185
Messenger RNA biogenesis [BR:
pgin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRZ67_07185
Ribosome biogenesis [BR:
pgin03009
]
Prokaryotic type
rRNA processing factors
FRZ67_07185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
PIG-L
Motif
Other DBs
NCBI-ProteinID:
QEC67081
UniProt:
A0A5B8V8C5
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All DBs
Position
1733227..1734777
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AA seq
516 aa
AA seq
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MNKELIINAAPTGVEIALLENKKLVELHHEKTDASFAVGDLYLGKVKKLIPGLNAAFVDV
GFEKDAFLHYTDLSPYARSLLKFTQLCVTEKSDQIPDFSKFQVEPEIIKTGKINEVLNGK
PDILVQILKEPIAAKGPRLSCEISLPGRFVVITPFNDIVAVSKKIHSGEERKRLQKIVEN
IKPKNFGVIVRTAAEGKNTAELHEDLLNLVETWKNIQRNLKNSVSPSKILSEQDKTTSIL
RDLLSEDFNRVVINDKNIYNDTLSYVNKIAPDKQDIVTHYHNGIPIFDQYGVTKQVKSSF
GKTVNLPSGAYLIIEHTEALHVIDVNSGYKSVSNNQEENALETNMEAAEEIARQLRLRDI
GGIIVVDFIDMKLPDNKRKVQEAMEEFMRTDRAKHAVLAISKFGLMQITRQRMRPEMSIN
TSEICPSCNGTGKVTSTLLLEDEIEKRLLYLVTHQHSNLTIFVHPILYSHLTKGWLFSIA
RKWKRKCKCKITVKPNSDYYFTEFHFFDANDEEIKF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagaactaattataaacgcagcaccaaccggtgttgaaattgccttgcttgaa
aacaaaaagctggtagaactgcatcatgaaaaaacagatgcaagttttgctgtgggcgac
ctttatcttggtaaagtaaaaaaactgatacccggtttaaatgctgctttcgtagatgtt
gggtttgagaaagatgcatttctgcattatacagatcttagtccgtatgcccgttccttg
ctcaaatttacccagctatgtgttacagaaaaatctgatcagatacctgatttctccaaa
ttccaggtagagcctgagatcataaaaacgggcaaaataaatgaagtacttaacggcaag
cccgatatattggtgcagatcttaaaagaacctattgctgcaaaaggcccgcgccttagt
tgcgagatctcattaccgggcaggtttgttgttattacccctttcaatgatattgttgcc
gtttccaaaaagatccattcaggcgaagaaagaaagagattacaaaagatcgttgagaac
attaaaccaaagaactttggcgtaattgtgcgcacagcagcagaaggcaagaatacagca
gagctgcatgaagacttgctaaacctcgtagaaacctggaaaaatattcagcgtaattta
aagaacagtgtttccccttctaaaatattaagcgagcaggataaaacaacttccattctc
cgtgatctgctgagcgaagatttcaaccgtgttgtgatcaacgacaagaatatttataac
gacaccctctcttacgttaataagatcgcacctgataaacaagatattgttactcattac
cacaacggcattcctatattcgaccagtatggtgtaaccaagcaggtaaaatcttctttt
ggtaaaacagttaacctgcccagcggcgcttaccttatcatcgagcatacagaagcgctt
catgtaattgatgtaaacagtggttacaaaagtgtaagtaataaccaggaagagaatgca
ttggagacaaacatggaagccgcagaagaaatagcaaggcaattacgcttacgagatatt
ggcggcattatcgttgttgactttatcgatatgaaacttcctgataacaaaagaaaggtt
caggaagccatggaagaattcatgcgtacagacagggcaaagcatgcggtgcttgccatt
tccaagtttggcctaatgcagatcacccgccagcgtatgcggcccgaaatgagtatcaat
acatctgagatctgcccaagttgcaatggcaccggaaaagtaaccagcaccttattgctc
gaggatgaaatagaaaaaagattactctatcttgttacgcaccaacacagcaatctaact
attttcgtgcatcccatcctttattcgcatcttacaaaaggttggttgttctctattgcc
cgtaaatggaaacgtaaatgcaagtgtaagattacagtaaagcccaattcagattattac
tttacagagtttcatttctttgatgcaaatgatgaagaaataaaattctga
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