KEGG   Panacibacter ginsenosidivorans: FRZ67_07580
Entry
FRZ67_07580       CDS       T06131                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pgin  Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:pgin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgin03032]
    FRZ67_07580
   03400 DNA repair and recombination proteins [BR:pgin03400]
    FRZ67_07580
Enzymes [BR:pgin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     FRZ67_07580
DNA replication proteins [BR:pgin03032]
 Prokaryotic type
  DNA Topoisomerases
   FRZ67_07580
DNA repair and recombination proteins [BR:pgin03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FRZ67_07580
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: QEC67159
UniProt: A0A5B8V7C8
LinkDB
Position
complement(1829003..1830088)
AA seq 361 aa
MEAIEIVPALNKQKIKRIGKDPVKAAKAVDLIYVSDSQPGILRVRNEKNFDYVFNNRKIK
IKKELDRIKSLVIPPAWEDVWICALANGHLQVTGKDALKRKQYRYHPAWNHLRNHTKFYK
MIAFAKALPAIRLQLEKDLALPELSQRKVLAAVVSLMQRTNIRVGNSTYEKLYGSFGLTT
LKDKHVAIEGSKLQFMFKGKKGVEHDVNITSKRLARIVKQCRDIPGKELFQYFDVNKERR
SIDSGMVNNYIKEISGEDFTAKDFRTWAGTVNAFLAFKELGFFETEAESKKKVVEALDNV
AKSLGNTRTVCKKYYVHPIIISMYEDKTLEKYLNELEKMEVNDNKADLTPEEKIVMKILE
N
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaagccatagaaattgttcctgctcttaacaaacaaaagatcaaacgaattggtaaa
gatcctgtgaaagctgctaaagctgttgatctcatttatgtttcagacagccagccgggc
attctgcgtgttcgcaatgagaagaactttgattatgtttttaataacaggaaaataaaa
attaaaaaagagcttgatcgcattaaaagccttgtaataccacccgcgtgggaagatgtg
tggatctgtgctttggcaaacgggcacctgcaggttacaggaaaagatgcattgaagcgt
aaacaatatcgttatcatccggcatggaatcatctgcgcaaccataccaagttttataaa
atgatagcttttgcaaaagcattacctgcaataagattgcagttagaaaaagacctggct
ttaccggaactttcacaaagaaaagtattggctgcggtggtcagtcttatgcaaagaaca
aatattcgtgttggtaatagtacgtatgaaaaattgtatggttcatttggtttaacaacg
ttgaaagacaaacatgtggccatagaaggtagtaagttgcaattcatgtttaaaggaaag
aaaggtgtggagcatgatgtgaatattacaagtaagcgtttagcaaggattgtaaaacaa
tgccgcgatattccagggaaagaactctttcagtattttgatgtgaacaaagaacgtagg
agcattgattcgggcatggtaaataattatatcaaagagatcagtggcgaagactttaca
gcaaaggatttcagaacgtgggcgggaacagtcaacgcttttcttgcatttaaagagctt
ggtttttttgaaacggaagctgagtcaaaaaagaaggttgttgaggcgttggataatgtt
gcaaaaagtcttggcaatacaagaacagtgtgtaaaaaatattatgtgcacccaatcatc
ataagtatgtatgaagataaaacgcttgaaaaatatttgaacgaacttgaaaagatggaa
gtaaatgataataaagctgaccttactccggaagaaaaaattgtgatgaagattttggag
aattaa

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