Panacibacter ginsenosidivorans: FRZ67_08910
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Entry
FRZ67_08910 CDS
T06131
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00300
Lysine biosynthesis
pgin00470
D-Amino acid metabolism
pgin01100
Metabolic pathways
pgin01110
Biosynthesis of secondary metabolites
pgin01120
Microbial metabolism in diverse environments
pgin01230
Biosynthesis of amino acids
Module
pgin_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FRZ67_08910 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FRZ67_08910 (lysA)
Enzymes [BR:
pgin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FRZ67_08910 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QEC67410
UniProt:
A0A5B8V7B9
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All DBs
Position
2133476..2134690
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AA seq
404 aa
AA seq
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MSQQLTKEQLISVANEYGTPVYVYHAEKIEEQLNELTNAFKDCNAKFFYACKSLTNINIL
KLIKQYGANLDCVSINEVNLGLKAGFAPKQILFTPNCVDFEEIEAGIALGVNVNIDNISL
LERFGNKYGHTYPVCIRLNPHIMAGGNFKISTGHIDSKFGISIHQMRHIERIVKTTNIHV
AGLHMHTGSEIKDVNVFLQGLEVMFDMARHFPKLEFIDLGSGFKVPYQDDDVKTDVASLG
KKVAEAFAVYEKENGRKLEIWFEPGKFLVSESGYFVVKANVIKQTTATVFVGVNSGFNHL
IRPMFYEAYHRIENISNPNGPERIYTVVGNICETDTFAWDRKLREVREGDFLVFYNAGAY
GFEMSSNFNSRLKPAEVLIKDGKAYLIRKRDEFADLLKNQVEVL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcaactaacaaaagaacaactgatcagtgtagctaatgagtatggtacaccg
gtatatgtttatcacgcagaaaaaatagaagagcagcttaatgaactaaccaatgcgttc
aaagattgtaatgcaaagtttttttatgcctgcaagtcgctgaccaatatcaatatttta
aaacttataaagcagtacggtgccaaccttgattgcgtaagcattaatgaagtgaatctt
ggtttaaaagccggctttgcaccaaaacaaattttatttacaccaaactgtgttgacttt
gaagagatcgaagcaggtattgcattaggcgttaatgtaaatattgacaacatttcttta
cttgaaaggtttggtaataaatacgggcatacttatcctgtttgcattcgtttaaatcca
catataatggcgggtgggaattttaaaatttctacgggccatatcgacagtaagtttggt
atttccattcaccagatgcgccacatagaacgtattgtaaaaacaaccaacatacacgtt
gcaggactgcatatgcatacgggtagcgagataaaagatgtaaatgtattcctgcagggt
ttggaagtaatgtttgatatggcgcgccattttccaaaactcgaattcattgatctcggc
agtggttttaaagtgccctaccaggatgatgatgtaaaaacagatgttgcgtcgcttggc
aaaaaagttgctgaggcatttgcagtgtatgaaaaagagaatggtcgtaaattagaaatc
tggtttgagccgggaaaatttctggtaagtgaatctggttattttgtagtaaaggcaaat
gtgatcaaacaaacaacagctactgtttttgttggcgtaaacagtggctttaatcatttg
atacgccctatgttttatgaagcgtaccaccgcattgaaaacatcagcaacccaaatggc
cctgaacgtatttacaccgttgtaggtaatatttgtgagacagatacttttgcatgggat
cgcaaactgcgtgaagtacgtgaaggtgattttcttgtgttttacaatgccggcgcttat
ggttttgaaatgagcagtaattttaatagtcgcctcaaacccgcagaagtattgataaaa
gatggcaaggcttatttaataagaaagcgtgatgagtttgctgatctgctgaagaaccag
gtagaagtgttgtaa
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