Panacibacter ginsenosidivorans: FRZ67_09250
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Entry
FRZ67_09250 CDS
T06131
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ67_09250 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgin03019
]
FRZ67_09250 (recQ)
03400 DNA repair and recombination proteins [BR:
pgin03400
]
FRZ67_09250 (recQ)
Enzymes [BR:
pgin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRZ67_09250 (recQ)
Messenger RNA biogenesis [BR:
pgin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FRZ67_09250 (recQ)
DNA repair and recombination proteins [BR:
pgin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FRZ67_09250 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ-1-like_HTH
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
HTH_40
HC2
Motif
Other DBs
NCBI-ProteinID:
QEC67472
UniProt:
A0A5B8V804
LinkDB
All DBs
Position
complement(2216796..2219093)
Genome browser
AA seq
765 aa
AA seq
DB search
MGTVTKKSVTKKAAVSKTASKKPVSKKSSASNIAHNHNILEGLRIHFGFEQFKGTQEESI
NSLLDGNDTFVIMPTGGGKSLCYQLPAMILEGCAIIVSPLIALMKNQVDLVRGYSENDNV
AHFLNSSLNKGQIKEVKDDLIAGKTKLLYVAPETLTKQENLDFFSDLTISFFAVDEAHCI
SEWGHDFRPEYRRLREMMDIINPDIAVVALTATATPKVQSDIVKNLGLRNPNIFISSFNR
PNLYYEILPKIKKDQTVKSIVRFISQNMGKSGIIYTLNRKTTEELAEVLVANNIKAVAYH
AGLDAKLRSERQDQFLNEDVQVIVATIAFGMGIDKPDIRFVIHFNIPKSIENYYQETGRA
GRDGLEGKCLLYYSHKDVSKLEHLMRDKPLSEREIGAQLINETVAYAESSVCRRKILLHY
FGEDRHEENCRNCDNCLHPKEKIESKDEAVKVLKVIKALDERFTAEYVVNVIIGKLTPQL
AMYRHEKLPEFGIGKDKDEHLWNSLIRQMLLENLIRKDIEEYGLLKFTELGQKFLKKPAS
FKIVLNNLFEEANADDEEGEGGSNASAAADDKLFEMLKDLRHKEAKKKGLPPFVIFLESS
LQDMATMYPTTLQELEKCQGVSKGKAIKYGKPFVDLIAKYVEENEVEKPDDFVMKSVANK
SSNKIYIIQNVDKKIPLETIARNKDLRLDALLEEMETIVASGTKLNLNYAIEDMLDEDEQ
DEIMDYFKSCQTSSLQVAQEELADGGYDWEQLKIMRIRFISEYGN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccgttactaaaaagtcagttactaaaaaggccgctgtttcaaaaacagcttca
aaaaaaccagtatcaaagaaatcttctgcaagcaacattgcccacaaccataatatactt
gaagggcttcgtattcattttggctttgaacaattcaaaggcacccaggaagaatcgatt
aacagtttactggatggcaatgatacattcgtaataatgccaacaggcggcggtaaaagc
ctttgttatcaattaccggcaatgatattggaaggttgtgccataattgttagcccgctt
attgctttaatgaaaaatcaggttgatctggtacgtggttacagcgagaatgataatgtt
gcacactttttaaattcgtcgcttaataaaggccagataaaggaagtaaaagatgatctt
attgcaggtaaaacaaaattgctttatgttgcgccggagactttaaccaagcaggaaaat
cttgacttcttcagcgatcttactatctcattttttgcagttgatgaagcacattgtatt
tcagaatgggggcacgatttcaggccggaatacagaagattacgggaaatgatggatatc
attaatcctgatattgcagtggtggcccttaccgcaacggctacaccaaaagtgcaaagt
gatattgtaaaaaaccttggcttacgcaatccgaatatttttatttcttcgtttaacaga
cccaatctttattacgaaatactgcctaagatcaaaaaagatcaaacggtaaaaagtatt
gttcgcttcatttcacagaatatgggcaagagtgggatcatctatacactcaacagaaaa
actacagaagaacttgcagaagtattggttgctaataatattaaagcagtagcgtatcat
gcaggactagacgctaagctaaggtccgaaaggcaggatcagtttttaaatgaagatgta
caggtaattgttgccactattgcatttgggatggggatagataaacctgatatacgtttt
gtgatacatttcaatatacctaaatcaatagagaattattatcaggaaaccggtcgtgct
ggccgcgatggtcttgaagggaaatgtctgttatattattctcataaagatgtttccaaa
cttgaacatttaatgcgtgataaaccattaagcgaaagggaaattggggcacaattaatc
aatgaaacagtggcatatgcagaaagttctgtatgccgccgtaaaatattactgcattat
ttcggtgaagacagacacgaagaaaattgccggaactgtgataattgtctgcatccaaaa
gagaagatcgaatcaaaagatgaagcagtaaaagtgctgaaggttattaaagctttggat
gaacgctttactgcagaatatgtggtaaatgttataataggaaaattaacgcctcaactg
gcaatgtacaggcacgagaagcttccggagtttggaatcggtaaagataaggatgaacac
ctgtggaacagtcttataagacaaatgttactcgaaaatcttatccgtaaagatattgaa
gaatatggactactgaagtttacagaacttggacaaaaatttttaaagaaaccagccagc
tttaaaattgtactcaacaatttatttgaagaggctaatgctgatgatgaagaaggcgaa
ggtggcagtaatgcaagtgcagcagcagatgataaactgttcgaaatgctgaaagacctg
cgccataaagaagcaaagaaaaaaggactccctccatttgtcattttccttgaatcttct
ctgcaggatatggctaccatgtatccaaccaccttacaggaactggaaaaatgccagggt
gtaagcaaaggcaaagccatcaaatacggaaagccttttgttgatttgattgcaaaatat
gtggaggaaaatgaagtggagaagccagatgattttgtaatgaaaagcgtcgctaataaa
agcagtaacaaaatatatattattcagaatgtagataaaaagataccgctcgaaaccatt
gcacgcaataaagatctgcgtttagatgcattgctcgaagaaatggaaaccatcgttgca
agcggcaccaaactcaatcttaattatgcaattgaagatatgcttgatgaagatgagcag
gatgaaataatggactatttcaaaagctgtcaaacatcttcattgcaggtagcacaggaa
gaacttgcggacggcggttacgattgggaacagctaaagatcatgcgcatcagatttata
agcgagtatggaaattaa
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integrated database retrieval system
