Panacibacter ginsenosidivorans: FRZ67_10030
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Entry
FRZ67_10030 CDS
T06131
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin03410
Base excision repair
pgin03430
Mismatch repair
pgin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRZ67_10030 (recJ)
03430 Mismatch repair
FRZ67_10030 (recJ)
03440 Homologous recombination
FRZ67_10030 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgin03400
]
FRZ67_10030 (recJ)
DNA repair and recombination proteins [BR:
pgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FRZ67_10030 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FRZ67_10030 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FRZ67_10030 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QEC67611
UniProt:
A0A5B8V9S7
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All DBs
Position
2395961..2397661
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AA seq
566 aa
AA seq
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MQKRWNIKKENEQDSATLSKALKIHPALCKILVQRGFNTFDKAKSFFRPQLSDLHAPWLM
KDMRLAVQRIEGAINNKENILVFGDYDVDGTTAVACMYRFLKNQYSNVEFYIPHRYREGY
GVSKAGIDFAKENNFTLIISLDCGIKSVDLITYAKTLGIDFIVCDHHLPDIEVPPAVAIL
NPKQKDCNYPYKELCGCGVGFKLIQALCETWQLPDTYFLEFLDLVATAIAADIVPVTGEN
RVLAFYGLKKVNENPCTGIKALLKLAAQEKEVHITNLVFIVAPRINAAGRMDDAKKAVQL
FIENDFDKALEYAEMLHNDNTDRREADSNITEEALAIIQNDVSLINRKTTVVYRDHWHKG
VVGIVASRLIESYYRPTIVLTKSGDIVAGSARSVPGFNLYEAIHACRQSLLGYGGHFAAA
GMTLLEENVKAFADKFEEVVHNTITEESLIPEIVIDAAINFRDITQTFYSIILQMEPFGP
GNMRPVFITRNAGETGFSKVVKEKHVRFVARQDGITLTGIGFNLAEKFHLLQKDKPFDIV
YTLDMNEWNGQQSLQLRVIDFNIPQV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaagatggaacataaaaaaggaaaatgaacaggattctgcaacattaagcaaa
gctttgaaaatccaccctgcactttgtaaaatcctggtacaaagagggtttaatacattc
gacaaagcaaaatcctttttcagaccacaactttcagatctccatgctccctggctcatg
aaagatatgaggctggcggtacaacgcattgaaggagcaattaataataaagaaaacata
ctagtctttggagattatgatgtagatggaacaacagctgttgcctgcatgtacaggttt
cttaaaaatcaatattctaatgttgaattttatatccctcatcgttatagagaaggttat
ggcgtctcaaaagccgggattgattttgccaaagaaaacaactttacacttattatttca
ctcgactgcggtataaaatctgtcgaccttattacttatgccaaaactcttggtatagat
ttcattgtttgcgatcaccacttaccagatattgaagtaccacccgccgttgccatcctg
aatccaaaacaaaaagattgtaattatccttataaagaattatgtggttgtggggttggt
tttaagttgattcaggcgctttgcgaaacctggcaattacctgatacttattttctcgaa
ttcctagatcttgttgctactgcaatcgcagccgatattgttcctgttaccggcgaaaac
agggttcttgccttttatggattaaagaaagtaaatgaaaatccatgtaccggaataaaa
gcattactaaaacttgcagcacaggaaaaagaagtacatataactaatcttgtttttatt
gtagcaccgcgtattaatgcagcaggtcgtatggacgacgcaaaaaaagccgtgcagctt
tttatagaaaatgatttcgataaagcgctggaatatgcggaaatgctgcataatgataat
acagaccgccgcgaagcagatagcaatattacagaagaagctctagccatcattcaaaat
gatgtttcgttaataaaccgtaaaacaactgtagtttatcgcgatcactggcataaaggc
gtggttggcattgttgcatcaaggcttattgaaagttattacaggccaactatagtactt
acaaaaagcggagatatagttgccggcagtgcccgcagtgtaccgggttttaatttatat
gaagccatacacgcatgcaggcaaagtttactcggctatggtgggcattttgcagcagca
ggtatgacgctgctcgaagaaaacgtaaaagcttttgcagataaattcgaggaagtagta
cataacaccatcaccgaggaatcgcttatacctgaaattgttattgatgctgcgataaat
tttagggacattacccaaacattctacagcattattcttcagatggaacctttcggtccc
gggaatatgcgccctgtctttattacaaggaacgccggggaaacgggtttttcaaaagtt
gtaaaagaaaaacatgtacgttttgttgcacgacaagacggcataacattaaccggtata
ggatttaacctggcagaaaaatttcatctattgcaaaaagataagccattcgatattgtt
tatacgcttgacatgaatgaatggaacggtcagcaaagcctgcaattaagagttattgat
ttcaatattcctcaagtttga
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