Panacibacter ginsenosidivorans: FRZ67_10715
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Entry
FRZ67_10715 CDS
T06131
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FRZ67_10715 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgin01007
]
FRZ67_10715 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgin03016
]
FRZ67_10715 (serS)
Enzymes [BR:
pgin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FRZ67_10715 (serS)
Amino acid related enzymes [BR:
pgin01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FRZ67_10715 (serS)
Transfer RNA biogenesis [BR:
pgin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FRZ67_10715 (serS)
Prokaryotic type
FRZ67_10715 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FapA
DUF4909
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QEC67743
UniProt:
A0A5B8V9Y9
LinkDB
All DBs
Position
complement(2544326..2545600)
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AA seq
424 aa
AA seq
DB search
MLQVNVLRQKPDWAKERLAFKNFKQTELVDEIIALDDERKRLQAEFDNTQALINVASKEI
GKLMGQGKKDEAEEQKATVANLKSTAGELNEKMSVTEKSLQEKLVVLPNLPSALVPPGTS
AEDNVVVRSGGVDNINLPANAVPHWDLIKTYDLVDFETGSKVTGRGFPFYKGKGAKLQRA
MIQYFLDFNTAAGYTEFIPPFMVNEASAYGTGQLPDKEGQMYHVTEDNFYLIPTSEVPLT
NIYRDEILKENELPIKMTAYSPCFRREAGSFGKDVRGLNRLHQFEKVEILQITHPEKSYD
ALEEMVHHVERLVQSLELPYRILKLCGGDMGFTSALTYDFEVYSAAQQRWLEVSSVSNME
SYQTNRLKCRFKDANGKTQLAHSLNGSSLALPRILASILENNQTENGIKIPQVLHKYFGA
EMIS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttacaggtaaatgtattgcgccagaaacctgattgggcaaaggaaaggttagcattt
aaaaactttaagcaaacggaactggttgatgagattattgcattggatgatgaacgtaaa
agattacaggccgagtttgataatacacaagctttaataaatgtggcctcaaaagagatc
ggcaaactaatggggcagggcaaaaaagatgaggcagaagaacaaaaagcaaccgttgca
aatctaaaatcaacagctggtgagctaaatgaaaaaatgtctgtaacagaaaaatcgttg
caggaaaaattggtcgtgctgcccaatctaccatccgcattagtacctccgggcacttct
gctgaggacaacgtagtggtaaggtctggcggcgtagacaatattaatcttccggccaat
gctgttccgcattgggatcttataaaaacatatgacctcgtagattttgaaactggctca
aaagtcaccggtcgtggtttccctttttacaaaggcaaaggtgccaaactgcaacgcgcc
atgatacagtattttcttgattttaatactgccgctggatatacagaatttattccgcca
ttcatggtaaatgaagcaagcgcttatggcaccggccagttgcccgataaagaaggacag
atgtatcatgtaacagaagacaatttttatcttattccaacatctgaagtaccacttacc
aatatctatcgcgatgaaattttaaaagaaaatgagctgcccataaaaatgacggcatat
tctccctgctttagaagagaggcaggaagttttggaaaagatgtgcgtgggttaaaccgt
ttgcaccaatttgaaaaagtagagatattacaaataacacatccggaaaaaagttatgac
gcactggaagaaatggtgcatcatgtagaacggcttgtacaaagccttgaactgccttac
cgcattttaaaactctgtggcggtgatatgggtttcaccagtgcacttacctacgatttt
gaagtgtacagtgcagcacagcaacgctggctcgaagtaagcagtgtaagtaatatggaa
agctatcagacaaatcgtcttaaatgcaggttcaaagatgccaatggtaaaacgcaactt
gcacatagccttaacggaagttcacttgcattgccgcgtatactggcaagcatacttgaa
aataaccaaaccgaaaatggaataaaaattccgcaggtactgcataaatattttggtgca
gagatgattagttag
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