Panacibacter ginsenosidivorans: FRZ67_11005
Help
Entry
FRZ67_11005 CDS
T06131
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgin01002
]
FRZ67_11005
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgin01011
]
FRZ67_11005
Peptidases and inhibitors [BR:
pgin01002
]
Cysteine peptidases
Family C82
FRZ67_11005
Peptidoglycan biosynthesis and degradation proteins [BR:
pgin01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FRZ67_11005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QEC67799
UniProt:
A0A5B8V984
LinkDB
All DBs
Position
complement(2617658..2619262)
Genome browser
AA seq
534 aa
AA seq
DB search
MKSNGIITLSVLLLLCYACGNNAHNKTVERDTTINETTSFNNLFLDSNTLHQFFVTNPRY
EKYEKQFDDFYKERNYEYAWFDSSGIGEQARGFINLLNSTISTMQDSSFYNERLMSLYNK
FEDSVEKKHTAEEVLNTELLLTGQFFHYTAKMYRGTDSNIADLGWFIPRKKINLTALLDS
VILTKNTQVDQFASLNEQYSKLSAFLPSLYALQKEGNWDSIPQRKKPLHLNDDTIIIATI
KDRLHRLGDLAEIDSTNRFDSALFTAVKSFQRRMGLSVDGAIGPKMIDEINITPTQRIQQ
ILVNLERMRWMPAPHKKHEFIYVNIPEYKMYVYNDDTLKFSMNVIVGTAANSTVIFSGDL
KFIVFAPYWNVPVKIVRTEIVPAIKKDPGYLVRNNMERTGGPDTLPSIRQLPGPLNSLGR
VKFLFPNNYDIYFHDTPNRNLFSASSRSFSHGCIRVGEPKKLAQFLLRTDTAWNDIRIDT
SMESHTEKWVTLPHTVPVMITYFTAFVDNEGVLNFRKDIYKHDERLADKLFARH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaatgggattatcactttatctgtcctgctattgctgtgctatgcctgtggc
aataatgcacataataaaaccgtggaaagagacaccactattaatgaaacaacatctttc
aataatttattcctggacagtaatacattgcatcagttttttgtaaccaaccccaggtat
gaaaaatatgaaaagcagttcgatgatttctacaaagaacgcaactatgaatatgcatgg
tttgacagcagcgggataggtgaacaggcacgcggttttattaatctgctcaacagcacg
ataagcactatgcaggatagcagtttttataatgaaaggttgatgtctctttacaacaaa
tttgaagacagtgttgaaaaaaaacatacggctgaggaagtgttaaatacagaactttta
ttgacaggtcaattctttcactacaccgcaaaaatgtacaggggaactgacagcaacatt
gcagatctcggctggttcataccaagaaaaaaaatcaatcttactgcgctgcttgattct
gtgatactgaccaagaatacacaggttgatcaatttgcttcgctgaatgaacagtacagt
aagctgagtgcttttctgccatctctatacgctttacaaaaagagggtaactgggactct
attccgcaaagaaagaaacctttgcatttgaatgatgataccataattattgcaaccata
aaagatcgtttacacaggcttggcgatcttgcagaaattgattcaactaacaggtttgat
tctgcactttttacagcagtaaaatcttttcaacgccggatgggcttgagtgttgacgga
gcaattggccccaagatgatcgatgagatcaatatcactcccacacaacgcattcaacag
atattggtgaatcttgaacgtatgcgctggatgccagcaccgcataaaaagcacgaattt
atttacgtgaatataccggagtacaaaatgtatgtgtataatgatgacacacttaaattt
agtatgaatgttattgtaggtaccgctgcaaacagcacggtaattttttccggagatctt
aaatttattgtatttgcaccttactggaatgtgcccgttaaaattgtaagaacagaaatt
gttcctgcaataaaaaaagatccaggttatcttgtcaggaataatatggagcgcaccggc
ggaccggacacattaccttccataagacaactgcctggcccgctaaactcgttgggcagg
gtaaaatttttgtttccaaacaattatgatatttactttcacgatacaccaaacaggaat
ttattttctgcttccagcagaagttttagtcacggttgcatacgcgtaggtgaacccaag
aaacttgcacaatttttactgcgcacagacacggcatggaatgacataagaattgatact
tccatggaaagccatactgaaaaatgggtaacacttccgcatacagttcctgtaatgata
acatactttacagcatttgtagataatgaaggagtgcttaattttcgcaaagacatttat
aaacatgatgaacgattggcagataaattgtttgcccggcattag
DBGET
integrated database retrieval system
