Panacibacter ginsenosidivorans: FRZ67_12135
Help
Entry
FRZ67_12135 CDS
T06131
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00521
Streptomycin biosynthesis
pgin00523
Polyketide sugar unit biosynthesis
pgin00541
Biosynthesis of various nucleotide sugars
pgin01100
Metabolic pathways
pgin01110
Biosynthesis of secondary metabolites
pgin01250
Biosynthesis of nucleotide sugars
Module
pgin_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FRZ67_12135 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FRZ67_12135 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FRZ67_12135 (rfbC)
Enzymes [BR:
pgin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FRZ67_12135 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
QEC68015
UniProt:
A0A5B8VA70
LinkDB
All DBs
Position
complement(2872300..2872851)
Genome browser
AA seq
183 aa
AA seq
DB search
MRIEETPLKDCYIIHDTVFEDSRGYFFESFNQQKFTALTGIANPFVQDNQSRSVRGVLRG
LHFQRGEHAQAKLVRVLQGSVLDVAVDIRKDSPTFGKHFAMELSDTSKTQLYIPRGFAHG
FIVLSDTAVFFYKCDNVYNKQSESGIIYNDPALGIDWKLDEASLLLSEKDKVNPLLKDIT
ETL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgaggaaacaccacttaaagattgttacattattcatgacaccgtttttgag
gacagccgtggttatttttttgagagttttaaccagcaaaaatttacagcgcttacagga
atagcaaatccttttgtacaagacaatcaatcacgctcagttcgtggtgtattgcgtggt
ctgcattttcagcggggagaacatgcgcaggcaaaactggtgcgtgtattgcaaggctca
gtgttagacgttgctgttgatataagaaaagattcgccaacattcggaaaacattttgca
atggaattgtctgacacatcgaagacacaattgtatataccacgtgggtttgcgcatgga
tttattgtattgagcgatactgctgtttttttttataaatgtgataatgtttacaacaag
caatctgaaagtggtattatttataacgacccggctttgggtattgactggaaacttgat
gaagcctctttattactaagtgaaaaagataaagtaaatcctttattaaaagacattact
gaaactttataa
DBGET
integrated database retrieval system
