Panacibacter ginsenosidivorans: FRZ67_13580
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Entry
FRZ67_13580 CDS
T06131
Name
(GenBank) hypothetical protein
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00550
Peptidoglycan biosynthesis
pgin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FRZ67_13580
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgin01002
]
FRZ67_13580
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgin01011
]
FRZ67_13580
Enzymes [BR:
pgin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FRZ67_13580
Peptidases and inhibitors [BR:
pgin01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
FRZ67_13580
Peptidoglycan biosynthesis and degradation proteins [BR:
pgin01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
FRZ67_13580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QEC68279
UniProt:
A0A5B8VAH9
LinkDB
All DBs
Position
3227029..3228372
Genome browser
AA seq
447 aa
AA seq
DB search
MKKFCLHFFLSQRLIAVLYFILLASCSVQRQINKTGTTNIIDNAANELINCQELSTAHVG
IAVYDPSENKYLCNYQSDKYFTPASNTKIITCYTAMKYLGDSLVGLRVDDCQNTLLLYPT
GDPTLLHSDFKTNPVVDFLKAQTSKLVYLKGKWEETALGQGWAWDDYQDYYSMERSALPV
YGNVVTVYGNNGSVAIQPAACIKNFSNSYTDSALFISHIKRALNANEFVADKYSKEESNP
SIPFIVSDSLVLQILADTIHKEIYTLSDGWHAFPPIVASYKIHSQPTDSLLKIMMHRSDN
FYAEQALLMVSDQELNVMSDEKIIDTLLKTDFKNMPQKPRWVDGSGLSRYNNFTPQDFVF
VLDKMRKEFSWNRITSIFPTGGSGTDLTGKVYAKSGSMSNITCLSGYIITNKRKTLIFSV
LVNNNMSTATIMRKKIDAFLSSVINAY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattttgtttgcatttctttttatcacaaagactaattgctgttttatatttt
atactgcttgcttcctgttctgtgcaaaggcaaataaataaaactggaactacaaacatt
attgataatgctgcaaatgaactaatcaactgtcaggaattatcaacggctcatgtaggt
attgctgtatacgatccttcagaaaataaatatctctgcaattatcaaagcgacaaatat
tttacacctgcgagtaataccaagatcattacctgctatactgccatgaaatatttggga
gatagtttggtagggttgcgtgtagatgattgccagaatactttactcttatatccaacc
ggcgatcctactttattacactccgattttaaaactaatcctgttgtggatttcctaaag
gcccaaacaagtaagcttgtatatttaaaaggaaaatgggaggaaactgctttaggccaa
ggctgggcctgggatgattaccaggattattattcaatggaaagaagtgctttacctgtt
tacggcaatgttgttacagtgtatggaaacaatggcagcgttgcaatacaaccagctgct
tgtataaaaaatttcagcaactcttatacggactcggctttattcattagccatataaaa
agagcgctgaatgcaaatgaattcgtagctgataagtatagcaaagaagaaagcaatccc
tcaataccttttattgtaagtgactcattagtgttgcagattctcgctgataccattcat
aaagagatatacacattatctgatggatggcatgcttttccgccaattgttgcttcttat
aaaatccattcccaacccactgattcgctcctcaaaataatgatgcaccgcagcgataat
ttctatgcagaacaagcattactcatggtgagtgatcaagaactcaatgtaatgagcgat
gaaaaaataattgataccttattaaaaacagatttcaaaaacatgcctcaaaagccgcgt
tgggtagatggcagcggactcagccgttataataattttacgccacaggactttgttttc
gtgttggataaaatgcgcaaagagttttcatggaatcgtatcaccagtattttcccaaca
ggtggcagtggaacagatcttacaggaaaggtctatgcaaagagtggctctatgagcaac
ataacttgtttaagtggttatataattaccaataaaagaaagacgctgatattctcagta
ctcgtcaataataacatgagtacagcaactataatgagaaaaaaaatagatgcatttttg
tcgtctgtaattaatgcgtattag
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