Panacibacter ginsenosidivorans: FRZ67_15560
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Entry
FRZ67_15560 CDS
T06131
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgin03036
]
FRZ67_15560 (xerD)
Chromosome and associated proteins [BR:
pgin03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
FRZ67_15560 (xerD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
QEC68655
UniProt:
A0A5B8VCA5
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All DBs
Position
3715321..3716223
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AA seq
300 aa
AA seq
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MWDAYKKGFKAYLQLEKSLSDNSVEAYLHDVDKLTQYLQANDSMKAPSELDLNDLQQFIK
SVAELGMTATSQARIISGIRGFYKYCLLENITAVDPSTLLETPKLKRALPDVLSFEEIEN
IIAQIDLSRSDGGRNKAILETMYSCGLRVSEVVGLKISCLYLDVGFVRVIGKGDKERLVP
IGSDAVKYIKIYKDDIRVHQPVQNGSSDILFLNKHGKGLSRVMIFYIIKDLAKKAGIVKN
ISPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTHLDRDFLRSTLHQFHPAFKK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatgcctataaaaaaggatttaaagcttacctgcaattagagaaatcgctgagc
gataactctgttgaagcatacctgcatgatgtagataaacttacacaatacctgcaggcc
aatgacagcatgaaagcgccgtctgaactggatctgaacgacctgcagcaatttataaaa
agcgttgctgaactgggtatgacggccacttcgcaggcaaggattatatcgggcattcgt
gggttttacaaatattgtttactcgaaaatataacagcagttgatccatcaaccttgctt
gaaacgcccaaattaaaaagagcattacctgatgtgttaagttttgaagaaattgaaaac
ataatagcacaaatagatcttagccgttctgatggtgggcgcaataaggccattcttgaa
acaatgtatagttgtggtttgcgtgtaagtgaagtagtgggtttaaagattagttgcctt
tacctggatgttggttttgttcgtgtgattggtaaaggtgacaaagaaagactggtgcct
attggcagcgatgcggtgaagtacatcaagatatataaagatgatataagggtacatcag
ccggtacaaaatggcagcagtgatattttatttttaaataaacatggcaaagggttaagt
cgtgtgatgattttttacattataaaagacctggcaaaaaaagcgggtattgttaaaaat
atttcaccacataccttccggcattcttttgccacgcatttggtagaaggcggcgcagac
ctgcgtgcagtgcaggaaatgctgggccacgaaagcattactactactgagatatataca
catctcgacagagattttcttcgttctacactacatcagttccatcctgcatttaagaaa
taa
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