Panacibacter ginsenosidivorans: FRZ67_15755
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Entry
FRZ67_15755 CDS
T06131
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00541
Biosynthesis of various nucleotide sugars
pgin01100
Metabolic pathways
pgin01250
Biosynthesis of nucleotide sugars
Module
pgin_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FRZ67_15755 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgin01005
]
FRZ67_15755 (rfaD)
Enzymes [BR:
pgin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FRZ67_15755 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pgin01005
]
Core region
FRZ67_15755 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
ThiF
Polysacc_synt_2
KR
NmrA
Sacchrp_dh_NADP
adh_short
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QEC68688
UniProt:
A0A5B8VEI4
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All DBs
Position
complement(3761793..3762791)
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AA seq
332 aa
AA seq
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MEKGYIVVTGAAGFIGSCMVQYLNEQGYTNLVIVDDFGVEEKRKNWEKKNYAHVVERYNL
FDWLELHQPTVDIVIHLGARTDTTEFDYAIHQELNVEYSQNVWNYCTKHNVPLIYASSAA
TYGAGELGYNDDHDVVEKLKPLNPYGVSKNEFDKWALQQTVTPPSWTGLKFFNVYGPNEY
HKARMASVIFHSFNQINKDGVVKLFKSHRSDFKDGEQLRDFVYVKDVVKVICWMMQSMVN
GQWSIKLNGLFNLGTGTARSFYDLASSTFRGVDKEPNIVFVDMPLDIRDKYQYFTEANMN
KLHNAGYTEPFYSLEAGVDDYVRNYLSAGKIW
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggttatatcgtcgttaccggtgcagcaggttttatcggcagttgcatggtg
caatatttaaatgaacaaggttataccaatcttgtaattgttgatgattttggtgtagaa
gaaaaaagaaagaactgggaaaagaaaaactatgcgcatgttgtagagcgctataattta
tttgactggcttgaattacatcaaccaacagttgatattgttattcaccttggcgcaaga
acagatactacagaatttgattatgctattcaccaggagttgaatgttgagtattcgcaa
aatgtatggaactattgcaccaaacataatgtaccattgatctacgcctcatctgctgca
acatacggcgcaggagaattaggatataatgacgatcatgatgtggttgaaaaattaaaa
ccgctcaatccatacggcgttagcaaaaatgaatttgacaaatgggcactacaacaaaca
gtaacaccaccatcctggaccgggttaaagtttttcaatgtgtacggaccaaatgaatat
cataaagcccgaatggcaagtgtgatctttcattcattcaatcaaatcaataaggatggt
gtagtaaagttatttaaaagccatcgttccgattttaaagacggggagcaacttagagac
ttcgtttatgtgaaggacgtagtaaaagttatttgctggatgatgcaatcaatggtcaat
ggtcaatggtcaataaaactgaatggcttgtttaatctcggtaccggcacagcacgcagt
ttctatgatcttgcatcttcaacatttcgtggagtagacaaagaaccaaatatcgttttc
gttgatatgcctttagatattcgggataaataccaatacttcacagaagcaaatatgaac
aaactgcacaacgcaggttatacagaaccattttattcgcttgaagcaggcgttgatgat
tatgtgcgtaattatttaagtgcaggaaagatttggtaa
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