Panacibacter ginsenosidivorans: FRZ67_18365
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Entry
FRZ67_18365 CDS
T06131
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ67_18365 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgin03019
]
FRZ67_18365 (groL)
03110 Chaperones and folding catalysts [BR:
pgin03110
]
FRZ67_18365 (groL)
03029 Mitochondrial biogenesis [BR:
pgin03029
]
FRZ67_18365 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgin04147
]
FRZ67_18365 (groL)
Enzymes [BR:
pgin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FRZ67_18365 (groL)
Messenger RNA biogenesis [BR:
pgin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FRZ67_18365 (groL)
Chaperones and folding catalysts [BR:
pgin03110
]
Heat shock proteins
HSP60 / Chaperonin
FRZ67_18365 (groL)
Mitochondrial biogenesis [BR:
pgin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FRZ67_18365 (groL)
Exosome [BR:
pgin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRZ67_18365 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FRZ67_18365 (groL)
Exosomal proteins of breast cancer cells
FRZ67_18365 (groL)
Exosomal proteins of colorectal cancer cells
FRZ67_18365 (groL)
Exosomal proteins of bladder cancer cells
FRZ67_18365 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5930
Motif
Other DBs
NCBI-ProteinID:
QEC69178
UniProt:
A0A5B8VFT2
LinkDB
All DBs
Position
4365832..4367454
Genome browser
AA seq
540 aa
AA seq
DB search
MSKLIEYDLDARKKLKNGVDRLAKAVIITLGPKGRNVVFEKIDGSPQMSCDGVTVAKQIE
LEDPVEEMGVKMIRDAAIRISEAAGDGTTTATLLARTLIDAGLKKVEAGMNPMDIKRGID
KAVKLVSEKLKQMAIPVGTDSAKIEQVATISAGNNPEIGKLIADAMRKAGKEGVITIEEA
KGFETYVEVVEGMQFDRGYLSPYFITNPDKMNVVYEKPFVLLYDKKISAMKEMLPLLDKI
SQSNEPLLIIAEDVEGEALAVLVVNKLRGVIQVAAVKAPGFGDRRKEILEDIAVLTGGTV
ISEEKGLKLENAELAHLGKCDKIIITKDKTTIIGGSGDKKNIDNAIIQIREQLKTTASDY
DKEKLQERLAKLTGGVAVVYVGASSEIELNVKKDVVDDALNATRAAMEEGIVPGGGVAYL
RCLKEFDKIQDTNDDENVGIEILRKALEEPLKQILVNAGIEPSEILQKVKSGENDFGYNA
KSEKFERLLETGIIDPVKVSRLALEYAASVAGMFITTECVIVKKPEKKDATIIATAQDMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcttatagaatatgatctcgatgcccgtaaaaaattaaagaacggggttgat
cgtttggcgaaagcagttattatcacacttggtccaaaaggccgtaacgtggtgtttgaa
aaaatagatggctcgccgcaaatgtcctgcgatggagttactgttgccaaacaaatagaa
ctggaagatcccgttgaagaaatgggcgtaaagatgatccgggatgcagctatcagaatt
tcagaggctgcaggcgatggaactacaactgccactttacttgcacgtactttgattgac
gccggcttaaaaaaagtggaagccggtatgaatccaatggatatcaaaagaggtattgac
aaggcggtaaaactcgtatcagaaaaattaaaacagatggccattcctgttggcactgat
agtgccaaaattgaacaggtggcaactatttcagcaggcaacaatcccgagattggaaaa
ctgatcgctgatgcaatgcgtaaggctggtaaagaaggcgtcatcactattgaagaagcg
aaaggttttgaaacctatgtggaagtagtggaaggtatgcagtttgatcgcggatattta
tcaccgtattttatcactaacccggataagatgaatgtggtatatgaaaaaccttttgtt
ctcctgtatgacaaaaaaatatcagcaatgaaagaaatgcttccactgcttgataaaatc
tcacagtctaatgaaccattgcttataatagcagaagatgtggaaggcgaagcccttgca
gtattggtggttaacaaattaagaggagttatacaggtggctgctgttaaggcacctggg
tttggagatcgcagaaaagaaatacttgaagacatagctgtgcttaccggtggaactgtt
atatcggaagaaaagggcttaaagttggaaaacgcagaactggcgcatcttggaaaatgt
gataaaataattattactaaagataagacaaccattatcggaggttccggcgataagaaa
aatattgataatgctataatacaaataagagagcaactaaaaacgactgcttctgattat
gataaagaaaaactgcaggagcgtctggctaaattaacaggaggcgttgccgtagtatac
gtgggtgcttcttcagaaattgaattgaatgtaaaaaaagacgtggtagatgatgcgctt
aacgccacccgcgctgctatggaagaaggcattgtgccgggaggaggcgttgcttattta
cgttgcttaaaggaatttgataagatccaggataccaacgacgacgaaaatgtaggtatt
gaaatattacgcaaagcattggaagaacccttaaaacaaattttagttaatgcagggatt
gagccatcagagattttacaaaaagtaaaatcaggtgagaatgattttgggtacaatgcg
aaatcagaaaaatttgaacgtttattggaaacaggcattattgatcccgtcaaagtaagc
cgccttgcattggaatatgctgcttcggtagcgggcatgtttataacaactgagtgcgtg
attgttaaaaagcctgagaaaaaagatgcaactattattgccacagcacaagatatgatg
taa
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