Panacibacter ginsenosidivorans: FRZ67_19165
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Entry
FRZ67_19165 CDS
T06131
Symbol
cas4
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pgin02048
]
FRZ67_19165 (cas4)
Enzymes [BR:
pgin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
FRZ67_19165 (cas4)
Prokaryotic defense system [BR:
pgin02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
FRZ67_19165 (cas4)
Subtype I-B factors
FRZ67_19165 (cas4)
Subtype I-C factors
FRZ67_19165 (cas4)
Subtype I-D factors
FRZ67_19165 (cas4)
Type II CRISPR-Cas system
Subtype II-B factors
FRZ67_19165 (cas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
PDDEXK_3
Motif
Other DBs
NCBI-ProteinID:
QEC69324
UniProt:
A0A5B8VCY2
LinkDB
All DBs
Position
4541603..4542106
Genome browser
AA seq
167 aa
AA seq
DB search
MTITATLINLYHVCKREMWLHANGVRMEQTSETVADGKLLHETAYPQRSEKYSEIEIGGS
KIDFYDAKNKVIHEIKKSDSFESAHEWQVKYYIWLLEQNGVEGVKGIIEYPKLRETKQVK
LSAEDKTYLQQIVQQIEALVSADVCPPRIEKKFCKTCSYFDFCWIEE
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaccgccactctcataaatctatatcatgtatgcaaacgcgaaatgtggttg
catgctaatggtgtaagaatggagcagacttccgaaacagtagcagatggcaaactgctg
catgaaacagcttatccgcaacgttcagagaaatacagtgaaatagagattggcggcagt
aagattgatttttatgatgcaaagaacaaagtgatccacgaaataaaaaaaagtgacagc
tttgaatcggcacatgagtggcaggtaaaatattatatatggctgctggagcaaaatggt
gttgaaggcgtgaaaggcattatcgaatatcccaaactgcgggaaacaaagcaggtgaaa
ttatctgcagaagataaaacatacctgcagcaaattgtacaacaaatagaagcattggta
agtgcagatgtttgtcccccacgtatagaaaagaagttttgcaaaacctgttcttatttt
gatttctgctggattgaggaatga
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