Panacibacter ginsenosidivorans: FRZ67_19615
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Entry
FRZ67_19615 CDS
T06131
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgin03400
]
FRZ67_19615 (radA)
DNA repair and recombination proteins [BR:
pgin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FRZ67_19615 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
Lon_C
AAA_22
AAA_24
AAA_16
AAA
AAA_14
SLFN-g3_helicase
nSTAND3
KdpD
NTPase_1
AAA_5
DUF7125
RUBY_RBDX
ABC_tran
Rad51
AAA_29
DZR
Motif
Other DBs
NCBI-ProteinID:
QEC70294
UniProt:
A0A5B8VFM6
LinkDB
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Position
complement(4643209..4644582)
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AA seq
457 aa
AA seq
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MSKIKTAFFCGNCGYESTKWLGKCPSCNQWNTFIEEVIDKGNSKTQDNWKTYNTEKRSTA
VIALTDVTSKEEKRITTNDPELNRVLGGGIVPGSIVLVAGEPGIGKSTLMLQDALELKNI
VTLYISGEESEQQIKMRADRLKISNENFYLLTETSTHIIFQEIKKLKPDFVIVDSIQTLQ
SDIAESSPGSITQIRECAAAFQRFAKETDTPVFLIGHITKDGTIAGPKLLEHMVDTVLQF
EGDRHYAYRILRTLKNRFGSTAELGIYEMTGDGMRAVLNPSEILINQKEEQLSGSAIAAS
MEGMRPLLIEVQALVTQSVYGTPQRTVTGFDLRRLQLLLAVLEKRGGFQFGVKDVFVNIA
GGLKVEDPSIDLSVICALLSSYEDVPLPAHICFAGEVGLNGEIRAVNRIEQRIAEAEKLG
FEKIVVSKFNKKGFDKNQFKIEIVALTRVDEVYRYLF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattaagaccgcattcttttgtggtaactgtggttatgaaagcaccaaatgg
cttggcaagtgtccttcatgtaatcaatggaatacatttatcgaagaggtgattgataaa
ggcaacagtaaaacacaagataactggaaaacatacaacacagaaaaaagatcaacagct
gtaattgcgttaactgatgttaccagcaaagaagaaaagagaattacaacaaatgatccc
gaattgaatcgtgttcttggcgggggaattgttccaggtagtattgtacttgttgcaggg
gagcccggaattggtaagagtacattaatgttgcaggatgctttagagttaaaaaatatt
gtaaccttatacataagcggtgaagaaagtgaacagcaaataaaaatgcgtgctgaccgc
ctcaaaattagtaatgaaaatttttacttactaacagaaacttcaacgcatattattttc
caggagatcaaaaaactaaaacctgattttgtaattgttgattcgattcaaacattgcaa
tctgatattgcagaatcatcccccggaagtatcacgcaaatacgtgaatgcgctgccgct
ttccagcgctttgcaaaagaaacagacacacctgtttttttgattgggcacattacaaaa
gacggaactattgctggaccaaaattattagagcacatggttgatacagttttgcaattc
gaaggtgatcgtcattatgcataccgcatattacgtacgctaaaaaatcgttttggcagc
actgcggagcttggtatttatgaaatgacaggtgatggtatgcgtgccgtattaaatcca
tctgagattcttatcaatcaaaaagaagaacaactaagcggcagcgcaattgcagcaagc
atggaaggtatgcgtccattattaattgaagtgcaggcattagtaacccagagtgtatat
ggcacaccgcaacgtactgttactggttttgatcttaggagactgcaactcttactcgca
gtacttgaaaaacgtggcggttttcagttcggtgttaaagatgtatttgtaaatattgcg
gggggcttaaaagtagaagatccgtcaattgatctttcagtcatttgtgcgctgttgtct
tcttatgaagatgtgccattgcctgcgcatatttgttttgcaggtgaagttggcttgaat
ggtgagatacgcgccgtgaatagaattgaacagcgcattgcggaagcagaaaaactgggc
tttgaaaagatcgttgtatctaaattcaataagaaaggttttgataaaaatcaatttaaa
atagaaatagttgcacttacaagagttgatgaagtatatcgttatttattttag
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