Panacibacter ginsenosidivorans: FRZ67_20560
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Entry
FRZ67_20560 CDS
T06131
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00300
Lysine biosynthesis
pgin00470
D-Amino acid metabolism
pgin01100
Metabolic pathways
pgin01110
Biosynthesis of secondary metabolites
pgin01120
Microbial metabolism in diverse environments
pgin01230
Biosynthesis of amino acids
Module
pgin_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FRZ67_20560
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FRZ67_20560
Enzymes [BR:
pgin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FRZ67_20560
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF7325
Motif
Other DBs
NCBI-ProteinID:
QEC69577
UniProt:
A0A5B8VDG6
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All DBs
Position
4832453..4833229
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AA seq
258 aa
AA seq
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MHIIFHKYQGTGNDFVIIDNRNNTIQLSTIQVKKICDRRFGIGADGLMLLNSKEGFDFEM
IYFNADGRESSMCGNGGRCLVKFAYNNGIHKRKYLFIAVDGKHEASVEDNGWVYLKMKDV
HGIEKHYADSVLDTGSPHYIKPVTDLTHFDVVKSGKDIRYSEEYKKNGINVNFVEQKDKS
IFVRTYERGVEDETLSCGTGVTAAALVYAHNDNGFNRVEIKTLGGNLAVEFDKLNDDTFE
NIWLCGPADFVFKGEIEI
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcatattatatttcataaataccagggcaccggaaatgattttgttataatcgataac
aggaacaatactattcagctttcaacaatacaggtaaaaaaaatatgcgaccgccgtttt
ggtattggtgcagatggattaatgctgcttaacagcaaagaaggttttgattttgaaatg
atctactttaatgcagatggccgtgaaagcagcatgtgtggtaacggtggccgctgtctc
gttaagtttgcttacaataatggtatacataaacgtaaatatttatttattgctgtagat
ggcaagcatgaagcttctgtagaagataatggttgggtttatttaaaaatgaaagatgtg
catggtatcgaaaagcattatgccgattcagtattagatacaggctcgccacattatata
aaacctgttactgaccttactcattttgacgtagtaaagtcgggcaaagatatcaggtat
agcgaggaatataaaaagaatggtattaatgtaaactttgtggagcaaaaagataaatca
atttttgtgcgtacttacgagcggggtgtagaagatgaaacccttagttgcggcacaggc
gttactgctgctgcattagtgtatgcacataatgataatggctttaaccgtgtagaaata
aaaacacttggcggtaaccttgcagtggagtttgataaacttaatgatgatacttttgaa
aacatctggctttgcggaccggcagattttgtatttaaaggcgagatagaaatttag
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