Panacibacter ginsenosidivorans: FRZ67_20690
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Entry
FRZ67_20690 CDS
T06131
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pgin
Panacibacter ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgin01002
]
FRZ67_20690
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgin01011
]
FRZ67_20690
Peptidases and inhibitors [BR:
pgin01002
]
Cysteine peptidases
Family C82
FRZ67_20690
Peptidoglycan biosynthesis and degradation proteins [BR:
pgin01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FRZ67_20690
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QEC70306
UniProt:
A0A5B8VI73
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All DBs
Position
complement(4860283..4861905)
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AA seq
540 aa
AA seq
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MKITTYVIIVFFLSVISFHFTACSDGKTEEHKAERPDTIPQPTKNDITIRGNFSDQRSLK
FDKKIIDAFLSRYPKLRSYKKDIDTFYAKRNFAFAWYDNNGLIEQAANLYNRMENISEEG
LPDSIPYKDAFTDLMKNDALDSTNTANEFTELMLTAQYFIYARTVWSGLDAKRMKSLDWF
LPRKTVSYNQLLDSLLTGKNILDTAPVYRQYALLRAQLKKYKDIESKGGFPTIKADKKTY
KQGDSSATIATIRKFLFVTGDLSNDNNSAIFDTTLTIAVKNFQHRYGEKEDGVIGSAILK
KMNIPISKLIQQIIVNMERCRWVPVNLVSNYVVVNIPAYKLYVYENDTVAFSMNVVVGQP
AHKTVIFNGTIKYIVFSPYWNVPSGILKNEVLPGIRKNSNYLASHNMEWNGGAVRQKPGP
NNSLGLVKFLFPNSYDIYLHDTPSKSLFGETNRAFSHGCIRISQPQKFAEYLLRHDSSWT
TEKIVAAMNSGKEQYVTLKETVPVFIAYFTTWVSKDGKINFRDDVYGRDKRLADMIFSKK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacaacctacgttataatagtgtttttcctgtctgttatttcttttcatttt
actgcatgcagtgatggaaaaacagaagaacataaagctgagaggcctgatactattcca
caacctaccaaaaatgatattaccatccggggtaattttagtgatcaacgttcattgaaa
tttgataaaaaaattattgatgcgtttctttcacgttatcctaaattaagatcatacaaa
aaagatattgatacattttacgccaaaagaaattttgcttttgcgtggtacgataataat
ggtttgatagaacaggctgccaacctatataaccgaatggaaaatataagtgaagaaggg
ctgccggatagtattccttataaggatgctttcacagacttaatgaagaatgatgcgctg
gacagtacaaatactgcaaatgaatttacagagctcatgcttaccgctcaatattttatt
tatgcaagaactgtatggagtggccttgatgcaaagagaatgaaatcgctcgattggttc
ctgccacgaaaaactgtttcctataaccaattgcttgattcattattaacaggaaaaaac
attcttgatacagcacctgtttacaggcagtatgcgctgttaagagcacaactaaaaaaa
tataaagacatagagagcaagggtggcttcccaacaattaaagcagataagaaaacatac
aagcaaggagattcatctgcaacaattgcaactatcagaaaatttctgtttgtaacaggc
gatctttcaaatgataataacagtgcaatctttgatactacacttacaattgccgttaaa
aattttcaacatcgttatggagaaaaagaagatggtgttattgggtccgctattcttaaa
aagatgaatattccaatcagtaagttaatacaacagatcattgtaaacatggagcgctgc
cgctgggttcctgttaatcttgtttcaaattatgtggttgtaaatatccccgcttacaaa
ttatatgtttacgaaaacgacacagttgcttttagcatgaacgtcgttgttggtcagcct
gcgcataaaactgttattttcaacggcactataaaatacatcgtgtttagcccttactgg
aatgtaccttcgggcattttaaaaaatgaagtgctcccgggcataagaaaaaattcaaat
taccttgccagtcataatatggaatggaatggtggtgccgtccgtcaaaaaccagggccc
aataattcacttgggcttgtaaaatttttatttcccaacagctatgatatttatttacat
gatacaccttccaaatctttatttggcgaaaccaatcgtgcatttagtcatggctgcatc
cgaatttcacagccacaaaaatttgctgagtatttgttaaggcacgattcatcatggact
acagaaaaaattgttgcagcaatgaatagcggtaaggagcaatatgtaacccttaaagaa
acagttcctgtttttattgcgtattttactacgtgggtaagcaaagatggaaaaataaat
ttcagggatgatgtgtatggaagagataagcgtcttgcagatatgattttttcaaaaaaa
taa
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