Paraburkholderia ginsengisoli: I6I06_00275
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Entry
I6I06_00275 CDS
T07246
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
I6I06_00275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgis03019
]
I6I06_00275
03009 Ribosome biogenesis [BR:
pgis03009
]
I6I06_00275
03036 Chromosome and associated proteins [BR:
pgis03036
]
I6I06_00275
Enzymes [BR:
pgis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
I6I06_00275
Messenger RNA biogenesis [BR:
pgis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6I06_00275
Ribosome biogenesis [BR:
pgis03009
]
Eukaryotic type
90S particles
RNase
I6I06_00275
Prokaryotic type
rRNA processing factors
I6I06_00275
Chromosome and associated proteins [BR:
pgis03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
I6I06_00275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QQC63983
UniProt:
A0A7T4N2D2
LinkDB
All DBs
Position
1:54626..55900
Genome browser
AA seq
424 aa
AA seq
DB search
MPLSPLESRLRYEFRNAELLRQALTHRSHSSTHNERLEFLGDSVLNCAVAALLFQRFGKL
DEGDLSRVRANLVKQQSLYEIAQALNISEGLRLGEGELRSGGFRRPSILADTLEAVLGAV
FLDGGFDAAQTVIKRLYVPILDHIDPRTLGKDAKTLLQEYLQGHKIALPTYTVVATHGAA
HNQQFEVECTVPKLDVKVSGSGASRRAAEQAAAKKALDEVMAAAPAVVAKPKRSKGARAA
KKAEPEIVPGVTGVQAALDLRSPERKSERGTARGEPRAAALDSAAERSAVEKSFAEKSAV
EKTTTERPTLTAAGAPLAVIRAAHVEYSGQDKAERADKPEKLDKADKAATHPTVTHTSDK
AAPADKPLDGKTDAASARSADRQRSREAIPGTAAASTSGASAAPTEHEPGVADAVQTRVA
DAGH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatctccgttggaaagccgactgcgctacgaatttcgcaatgcggaattgttg
cgccaggctttaacgcaccgtagtcatagttccacgcacaacgaacggctcgaatttctc
ggcgactccgttctgaattgcgcggtggctgcgcttttgttccaacgtttcggcaaactg
gacgaaggcgatctgtcgcgcgttcgtgccaatctggtgaagcaacagtcgctatacgaa
atcgctcaggcgcttaatatttcagaaggcttacgactcggcgaaggcgaattgcgcagc
ggtggtttccgccgcccgtcgatcctcgccgacacgcttgaagcggtgctgggcgcggtg
ttcctcgatggcggcttcgacgccgcgcagacggtcatcaagcgcctgtacgtgccgatt
ctcgatcacatcgatccgcgcacgctcggcaaggatgccaagacgctgctgcaggagtat
ctgcaaggtcacaagatcgcgctgccgacttacacggtcgtcgcgacgcatggtgcggca
cacaatcagcagttcgaagtcgaatgcacggtgccgaagctggacgtgaaagtgtccggt
tccggcgcgagtcgtcgcgcggcggagcaggcggcggccaagaaggcgctcgacgaagtg
atggcggcggcccccgccgttgtcgcgaagccgaagcgttccaagggcgcgcgcgcggcg
aaaaaagccgagccggagattgtgcccggcgtcacgggtgtccaggccgcgctggatttg
cgcagcccggagcgcaagagcgaacgcggtacggcacgcggcgaaccgcgcgctgcggct
ctggactccgctgctgaaaggtcggccgtggaaaagtcctttgccgaaaagtccgccgtg
gaaaaaaccaccaccgaacgccccacgttgaccgccgccggcgcaccgctcgcagtcatt
cgcgcggcgcacgtcgagtacagcgggcaggacaaagccgagcgcgccgacaagcccgaa
aagttggataaggcggacaaagctgccacccacccgacggtcacgcacacgagcgacaaa
gcagcaccagcggacaaaccgctcgacggcaaaaccgacgccgcgtccgcgcgcagcgca
gaccgccagcgcagccgcgaagcgatacccggtacagccgccgcgtccacatcaggcgcg
tcggccgcccccaccgaacacgaacccggcgtagccgacgcggtgcaaacccgcgtcgcc
gatgcgggccattga
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