Paraburkholderia ginsengisoli: I6I06_00790
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Entry
I6I06_00790 CDS
T07246
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03420
Nucleotide excision repair
pgis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6I06_00790
03430 Mismatch repair
I6I06_00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgis03400
]
I6I06_00790
Enzymes [BR:
pgis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6I06_00790
DNA repair and recombination proteins [BR:
pgis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6I06_00790
MMR (mismatch excision repair)
Other MMR factors
I6I06_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QQC64074
UniProt:
A0A7T4N2P6
LinkDB
All DBs
Position
1:171301..173652
Genome browser
AA seq
783 aa
AA seq
DB search
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKLLAGQTNSI
FAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRR
LGKNLRTDAGHGEPVRVYESATDTQEAGWIVEEIKALISTGTSRSEIAILYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVAGKAGSSLAAFANLIGKMRAETERMSLPETVEYVVRTSG
LADFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPELAVATD
DPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPGYTGPASSTPAPLPS
FANEQRAAETGFRVGQQVFHTKFGEGTITALEGGGTDAKAQVKFKRHGEKWLALAVAKLQ
AVE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctagccaatctcaaccccgaacaacacgccgccgtcacactccccaac
gagcccgcgctgattctcgcgggtgcgggcagcggcaaaacccgcgtcctgattacgcgt
atcgcgtggctcatccagcacggtctcgcgtcgcccgccacgattctggcggtgaccttc
accaacaaggccgcccgcgaaatgatgtcgcgtctgtcggcgctcttgccgatcgacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatcat
cgcgacgcggggctgccggcgaccttccagattctcgataccgcggatcaactctccgcg
atcaagcgtctgatgaagggcctcaacatcgacgacgaaaaataccccgcgaagaacctg
cagtacttcatcaacaacgcgaaagagcaggggctgcggccgaaagacgttgacgcgacc
gacaacttcaaccgcaaatttgtcgagctctacgaagcctacgatcagcaatgccagcgc
gaaggcgtggtcgactttccggaactgctgctgcgctgctacgaactcctcgcgcacaat
ccgccgctgcgcgcgcattatcaggcgcgtttccggcacatcctcgtcgacgagttccag
gataccaacaagctgcaatacgcgtggctcaagctgctcgcggggcagaccaactcgatc
ttcgcggtcggcgacgacgaccagtccatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgagcacgagttcaacgtgcgtcacctgatcaagctcgaacagaattac
cgctcgcacggccatattctcgatgccgcgaatcagctgatcgccaacaattcacggcgc
ctcggcaagaatctgcgcacggatgcgggtcatggcgaaccggtgcgggtctacgagtcc
gcgaccgatacgcaggaagccggctggatcgtcgaggaaatcaaggcgctgatcagcacc
ggcacgtcgcgcagcgagatcgcgattctctatcgcagcaacgcgcagtcgcgcacgatc
gaacacacgctcgtcaatgcgggcatcgcgtatcgcgtgtatggcggcctgcgctttttc
gagcgccaggaagtcaagcatgcactcgcgtatctgcgcctgatcgacaacccgaacgat
gacaccgcgttcgcgcgcgtcgtcaatttcccgacgcgcggcatcggcgcgcgttcgatc
gagcagctcgcggacgcggcgcgtctgtacaactgctcgatggccgccgcgattccgtac
gtcgccggcaaggcggggtcgagcctcgcggccttcgcgaacctgatcggcaagatgcgc
gcggaaacggaacgcatgagcctgccggaaacggtcgagtacgtggtgcgcacgagcggt
ctcgcagatttttatcagaacgaacgcgaaggtcaggaccggctggagaacttgcaggaa
ctggtcaacgcggccgccgcgttcgtcagcgaagagggctacgggatggacacgcccgcg
cgctcgattccgctgcgcccgggcgcgaccgccgcgcccgaactggcggtcgccaccgac
gatccgaataccgtcgtgctggacgcgcccggcatcgccgatcccgcgcaaaatcccgac
acgatgacgccgctcgccggcttcctgtcgcacgcatcgctcgaagcgggcgacaaccag
gcgcaagccggccaggaagcggtgcaactgatgacggttcacgcggcgaaggggctggag
ttcacggcggtgttcatcaccggtctcgaagaggggctgttcccgcacgagaacagcgcg
atggaatcggacggtctcgaagaggagcggcgtctgatgtacgtggcgatcacgcgcgcg
aaggagcggctgtatctgtcgttcgcgcagagtcggatgctgcacggccagacgcgctat
aacatccgttcgcgcttcttcgacgaactgccgcaggagacgctgaagtggctcacgccg
aaggtcgaggcgggcgcgcgctggggcggccgctccgataacgcgggctatgggcgcgac
tggtttgcgcggccgggttatacggggcccgcgtcgtcgacgccggcgccgctgccgtcc
ttcgcgaacgagcagcgcgcggcggagacgggctttcgcgtcggccagcaggtgttccac
acgaagttcggcgaaggcacgatcaccgcactcgaaggcggcggcaccgacgcgaaggcg
caggtcaaattcaagcggcacggcgagaagtggctggcgctcgcggtcgcgaaattgcag
gcggtggaatga
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