Paraburkholderia ginsengisoli: I6I06_01445 Help Entry I6I06_01445       CDS       T07246                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism pgis  Paraburkholderia ginsengisoli Brite KEGG Orthology (KO) [BR:pgis00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pgis03019]     I6I06_01445 (hrpA) Enzymes [BR:pgis01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      I6I06_01445 (hrpA) Messenger RNA biogenesis [BR:pgis03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      I6I06_01445 (hrpA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 T2SSE NACHT AAA_30 AAA_23 TsaE PhoH AAA_16 Myosin_head Motif Other DBs NCBI-ProteinID:  QQC64195 UniProt:  A0A7T4N2T8 LinkDB All DBs Position 1:317895..322352 Genome browser AA seq 1485 aa AA seqDB search MSNVPKSPAAANENPAPAADQMNTGDAKRRPAQDTEPNTPHAAREPHRAGEGAQVPAQEN KSPRERDSRARHTAGSGASQAARGDVRANQQSRGSAPGGEARREAGAPARKAPREGGAER DGGRRESREAHEAGGAGGSRELREPREPRLPRAPRAARVVEPNPIPPITFPEALPVSGRR DEIAKAIAENQVVIVSGETGSGKTTQLPKICLALGRGLGAGGAGLIGHTQPRRIAASATG RRIAEELGTPFGEVVGYKVRFTDNLSPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEA HERSLNIDFLLGYLKEILAKRPDLKLIVTSATIDADRFARHFGSEEKPAPVIEVSGRLYP VEVRYCPVVEDSPAVKAAQGTSSGASSSRGDRPKTQRETDRDLMDAIVDAVDELCREGPG DVLVFLPGEREIRDAAEALRKHHPPHTEILPLFARLSAAEQERVFRTSNARRIVLATNVA ETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQVESISQAAANQRAGRCGRVADGVCIRL YEESDFQGRVRFTDPEILRSSLASVILRMKSLHLTAIETFPFIEPPPGRAIADGYQLLNE LGAVDDDNQLTPLGRELARLPLDPRVGRMILAARDQQALKEVLIIASALSVQDPRDRPIE AQEQADQAHRRFADERSEFLQWLKIWNWFEEAIAHKKSNKQLHEECRKNFLSQLRLREWR DVHSQLLTVVREHGWRINDAEATFEQIHLALLTGLLGNIGLKADDEPYYLGARGIKFYLW PGSALVKKAGKWVMAAELVETSRLYARCIAKIEPEWVEKIGAHLLKKSLSEPHWEKRAAQ VSAFERAMLYGLPIYHRRRVSFGKQDPARARELFIRGALVEGEFDTKLAFFAHNRKLLAD IEQLEHKSRRQDVLVDDELIFAFYDQALPGGIYTGASFERWYRDEVKKSGQPEDKLRLLY LSRDDLMRHEAAGVTTDLFPKRMTMAGVEMALSYHFEPGSPRDGVTLAVPLYALNQVDAR RCEWLVPGMLKEKTQLLLKSLPQKLRRHCVPLPEYAAGFVDRHSGPKFGAGGLLESLIAD IREQTQVAMKQSDFKLETLPPHLFMNFKIVDEHGRQLAMGRNLSQLRAELGGQAQQHFQK IASSAAGAALADAGGGGVATPAQGAGAAGGAGVARGGAAQRGKGAAVAGPQTALQEGAGG TALYEKLTTWNFGKLPELLEIRRGGQTLFGYPALVDRGTHCDVEVFDSPDEAARIHRAGL RRLFALQLKEPIKYLEKNLPGLREMAMQFMPRGTQEELRDQLIDTALDRACLQDPLPDDD VSFHTRRDEGRSRLTLLAQEIARLVGQILGEYASVTKKLVQAKSFTAAYADMQSQLDGLI GKRFVVDTPYAQLAHFPRYLKGMALRIDKLKAEPPRDARQFAEFAPLLQNYQRAVAQRGG VLDPRLSEFRWLLEELRISLFAQELRTPMPVSVKRLYKVWESMQR NT seq 4458 nt NT seq  +upstreamnt  +downstreamnt atgtcgaatgtacccaaaagtcccgctgcggcgaacgagaatccggcgccggccgccgat cagatgaacaccggcgacgcgaagcgccgtcctgcgcaggacaccgagcccaacacgccg cacgcggcgcgcgaaccgcatcgtgcgggagaaggcgcgcaggtgccggcgcaggaaaat aaatcgccgcgcgagcgcgactcgcgtgcgcggcacaccgccggcagcggcgcttcacaa gctgcacgcggtgacgttcgcgccaatcagcagagccgcgggtcggcgccgggcggtgag gcgcggcgcgaagccggcgcccccgcccggaaagcgccgcgagagggcggtgccgaacgc gatggcgggcgccgcgaatcgcgggaagcgcatgaagcaggtggggcaggcggttcgcgc gagctgcgtgaaccgcgtgagccacgccttccccgcgccccgcgagcggcgcgcgtcgtc gaaccgaatccgattccgccgatcacgttccccgaagcgctgccggtctccggccgccgc gacgagatcgccaaagcgatcgcggagaatcaggtggtgatcgtgtcgggtgagacgggc tccggcaagaccactcagttgccgaaaatctgcctcgcgttagggcgtgggctcggcgcg ggcggcgcgggtctgatcggccacacgcagccgcgccggatcgccgcgtcggcgaccggg cggcgcattgccgaagaactcggcacgccattcggcgaagtggtcggctacaaggtgcgc ttcaccgacaacctgtcgccgggcgcgtccgtcaagctgatgaccgacggcatcctgctc gccgaaacgcagaccgatccgctgctcaaagcgtacgacacgctgatcatcgacgaagcg cacgagcgcagcctgaacatcgatttcctgctcggctatctgaaggaaattctcgcgaag cgtcccgatctgaagctgatcgtgacgtcggcgaccatcgacgccgatcgcttcgcgcgc catttcggcagcgaagagaaacccgcgccggtgatcgaggtgagcgggcggctctatccg gtcgaggtgcgttattgcccggtcgtcgaggacagcccggcggtgaaggcggcgcagggg acgtcgtctggcgcatcgtcatcgcgtggcgacaggccgaagacccagcgcgagaccgat cgcgatctgatggacgcgatcgtcgacgcggtcgacgaactgtgccgcgaaggtcccggc gacgtgctggtgttcctgcccggcgagcgcgagattcgcgatgccgccgaagcgttgcgc aagcaccacccgccgcatacggaaatcctgccgctgttcgcgcggctgtccgcggccgaa caggagcgcgtgttccgcacgtcgaacgcgcgccgtatcgtgctggcgaccaacgttgcc gaaacctcgctgacggtgccgggcatccgctacgtggtcgacaccggtctcgcgcgcgtg aagcgctactcgtatcgcaacaaggtcgagcagctgcaggtcgagtcgatttcgcaggcc gccgcgaatcagcgggccgggcgctgcggccgcgtcgccgatggcgtgtgcattcgtctc tacgaggaaagcgatttccagggccgcgtgcgcttcaccgatccggagattctgcgctcg tcgctggcgtcggtgatcttgcggatgaagtcgctgcatctgaccgcgatcgaaaccttc cccttcatcgagccgccgccgggccgcgcgatcgccgacggttaccagttgctcaacgag ctcggcgcggtcgacgacgacaaccagctcacgccgctcggccgcgaactcgcgcggctg ccgctcgatccgcgcgtcggccggatgattctcgccgcgcgcgatcagcaggcgttgaag gaagtgctgatcatcgccagtgcgttgtcggtgcaggatccgcgcgaccggccgatcgaa gcgcaggagcaggccgaccaggcgcatcgccgtttcgccgacgagcgctcggaatttttg cagtggctaaaaatctggaactggttcgaagaggcaattgcgcacaagaagtcgaacaag cagctgcacgaggagtgccgcaagaacttcctgtcgcaactgcggctgcgggaatggcgc gacgtgcactcgcaattgctgacggtggtgcgcgagcatggctggcgcatcaacgacgct gaggcgactttcgagcagatccatctggcgctgctgaccggtctgctcggcaacatcggc ctgaaagccgacgacgaaccgtactatctcggcgcgcgcggcatcaagttctatctgtgg cctggctcggcgctggtgaagaaggcgggcaagtgggtgatggccgccgaactggtcgag acgagtcgtctgtacgcgcgctgcatcgcgaagatcgagcccgagtgggtcgagaagatc ggcgcgcatctgctgaagaaatcgctttccgagccgcattgggagaagcgcgcggcgcag gtgtccgcgttcgagcgcgcgatgctctatggcctgccgatctatcaccggcggcgcgtg agtttcggcaaacaggacccggcgcgcgcgagagagttgttcattcgcggcgcgctggtc gaaggcgagttcgatacgaagctcgcgttcttcgcgcacaaccgcaagctgctcgccgac atcgagcaactggaacacaagtcgcgccgtcaggacgtgctggtcgacgacgaactgatt ttcgcgttctacgatcaggcgttgcctggcggcatttacaccggcgcgtcgttcgagcgc tggtatcgcgacgaggtgaaaaagagcggccagccggaagacaagctgcgcctgctgtat ctgtcgcgcgatgatctgatgcgccacgaagccgccggcgtgacgaccgatctgttcccg aaacggatgacgatggccggcgtcgagatggcgctcagctatcacttcgaaccgggctcg ccgcgcgatggcgtcacgctcgccgtgccgctctacgcgctcaatcaggtcgacgctcgc cgctgcgagtggctcgtgccgggcatgctgaaagagaagacgcaactgttactgaaatcg ttgccgcagaagttgcggcggcattgcgtgccgttgccggagtacgcggccggtttcgtc gatcggcacagcggcccgaaattcggcgcgggcggtttgctggagtcgttgatcgccgat attcgcgagcagacccaggtcgcgatgaagcagtcggacttcaagctcgaaaccttgccg ccgcatctgttcatgaacttcaagatcgtcgacgagcacgggcggcagctcgcgatgggg cgcaatctgtcgcagctacgcgccgaactcggcgggcaggcgcagcagcatttccagaag atcgcgtcgagcgcggcgggcgcggcgttggcggatgcgggcggcgggggtgttgcgacg cctgcgcaaggagccggtgcggcaggtggggccggtgtcgcgcgtggcggcgctgcgcag cgcggcaagggcgcagcggtggccggtccgcaaaccgcgttgcaagagggggcggggggc accgcgctttacgaaaaactcaccacgtggaatttcggcaagcttcccgagttgctcgag attcgccgcggcgggcagacgctgttcggctatccggcgctggtggatcgcggcacgcat tgcgatgtcgaagtgttcgattcgccggatgaggccgcccggattcatcgcgcgggattg cgccggctcttcgccttgcagttgaaggaaccgatcaagtatctggagaagaacctgccc ggcctgcgcgaaatggcgatgcagttcatgccgcgcggcacgcaggaagaactgcgcgac caactgatcgataccgcgctcgatcgcgcgtgtctgcaagacccgctgccggacgacgac gtcagtttccacacgcgacgcgacgagggacgcagccgcctgacgctgctcgcgcaggag atcgcgcggctggtcgggcagattctcggcgaatacgcgagcgtgacgaagaagctggtg caggcgaagtcgttcacggccgcgtatgccgacatgcagagtcagctggatggattgatc ggtaagcgcttcgtggtcgacacgccgtacgcgcagttggcgcactttccgcgctatctg aagggaatggcgctgcgtatcgacaagctgaaggcggagccgccgcgcgacgcccggcag tttgcggagtttgcgccgctgctgcagaactatcagcgtgcggtggcgcagcgtgggggt gtgctggacccgcgcttgtcggagtttcgctggctgctggaggagttgcggatctcgctc tttgcccaggagttgcggacgccgatgccggtttcggtgaagcggttgtacaaggtttgg gagtcgatgcagcggtga

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