KEGG   Paraburkholderia ginsengisoli: I6I06_01575
Entry
I6I06_01575       CDS       T07246                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pgis  Paraburkholderia ginsengisoli
Pathway
pgis00010  Glycolysis / Gluconeogenesis
pgis00020  Citrate cycle (TCA cycle)
pgis00260  Glycine, serine and threonine metabolism
pgis00280  Valine, leucine and isoleucine degradation
pgis00310  Lysine degradation
pgis00380  Tryptophan metabolism
pgis00620  Pyruvate metabolism
pgis00630  Glyoxylate and dicarboxylate metabolism
pgis00640  Propanoate metabolism
pgis00670  One carbon pool by folate
pgis00785  Lipoic acid metabolism
pgis01100  Metabolic pathways
pgis01110  Biosynthesis of secondary metabolites
pgis01120  Microbial metabolism in diverse environments
pgis01200  Carbon metabolism
pgis01210  2-Oxocarboxylic acid metabolism
pgis01240  Biosynthesis of cofactors
Module
pgis_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pgis_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pgis_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pgis_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pgis00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    I6I06_01575 (lpdA)
   00020 Citrate cycle (TCA cycle)
    I6I06_01575 (lpdA)
   00620 Pyruvate metabolism
    I6I06_01575 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    I6I06_01575 (lpdA)
   00640 Propanoate metabolism
    I6I06_01575 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    I6I06_01575 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    I6I06_01575 (lpdA)
   00310 Lysine degradation
    I6I06_01575 (lpdA)
   00380 Tryptophan metabolism
    I6I06_01575 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    I6I06_01575 (lpdA)
   00670 One carbon pool by folate
    I6I06_01575 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgis04147]
    I6I06_01575 (lpdA)
Enzymes [BR:pgis01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     I6I06_01575 (lpdA)
Exosome [BR:pgis04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   I6I06_01575 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA NAD_binding_8 AlaDh_PNT_C Pyr_redox_3 Biotin_lipoyl_2 GCV_H FAD_binding_2 Thi4 DAO 3HCDH_N Peptidase_M23 FAD_binding_3 PASTA
Other DBs
NCBI-ProteinID: QQC64220
UniProt: A0A7T4T9B9
LinkDB
Position
1:358087..359880
AA seq 597 aa
MSLVEVKVPDIGDFKDVDVIEVNIKPGDAIEKEQSLLTLESDKASMEVPSDVAGTVKEVR
VKAGEKVSQGTVVALVETSGEAAPAKDAPTAAAREPEKAAAPAPAPAPAAAPKAAAPAPQ
AGSFSGSADIECDMLVLGSGPGGYSAAFRSADLGMKTVLVERYSTLGGVCLNVGCIPSKA
LLHTALVIDEAEALGAHGITFAKPQIDLDKLRDFKSGVVKKLTGGLAGMAKARKVEVVTG
TGAFVDPNHMEVQTEGGKKVVKFKQAIIAAGSEAVKLPFIPEDPRVVDSTGALELRQIPQ
RMLVIGGGIIGLEMATVYATLGAKIDVVEMLDGLMAGADRDLVKVWEKYNSKRFANVMLK
TKTTAAEAKDDGIYVSFEGEKAPAEAQRYDLVLVAVGRSPNGKKIGADKAGVAVTERGFI
DVDKQMRTNVPHIFAIGDIVGQPMLAHKAVHEGHVAAEAAHGEKAYFDALQIPSVAYTDP
EVAWAGKTEDQLKAEGVKYGKAVFPWAASGRAIANGRDEGFTKLLFDEETHRVIGGGIVG
LNAGDLISEVCLAVEMGADATDIGKTIHPHPTLGESIGMAAELYEGVCTDLPPQKKK
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgagtctcgtcgaagtaaaagtgccggatatcggtgacttcaaggacgtcgatgtcatc
gaagtcaatatcaagccgggcgatgcgatcgaaaaagagcagtcgctgctgacgctcgaa
tccgataaggcttccatggaagtgccgagcgatgtcgccggcaccgtcaaggaagtccgc
gtcaaagccggtgaaaaggtctcgcagggcacggtggtcgcgctcgtcgaaacgtccggt
gaagcggcgcctgctaaagatgcaccgacggccgcggccagggagcccgaaaaagcggct
gctccggctccggctcccgctcccgctgctgcgcccaaggccgcggctcccgcgccgcaa
gcgggcagcttctccggcagcgccgacatcgaatgcgacatgctcgtgctcggttcgggc
cccggcggctattcggcagcgttccgctcggctgacctgggcatgaagacggtgctggtc
gagcgttactcgacgctcggcggcgtgtgtctgaacgtcggctgcattccgtcgaaagcg
ctgctgcatacggcgctggtgatcgacgaagccgaagcgctcggcgcgcacggcatcacg
ttcgccaagccgcagatcgatctggacaagctgcgtgacttcaagtccggcgtcgtcaag
aagctgaccggcggtctcgccggcatggccaaggcgcgcaaggtcgaagtagtgacgggc
accggcgcgttcgtcgacccgaatcacatggaagtgcagaccgaaggcggcaagaaggtc
gtcaagttcaagcaggcgatcatcgccgcgggctcggaagcggtgaagctgccgttcatt
ccggaagacccgcgtgtggtcgattcgaccggcgcgctcgaactgcggcagattccgcaa
cgcatgctggtgatcggcggcggcatcatcggcctggaaatggcgacggtgtacgcgacg
ctcggcgcgaagatcgacgtggtcgaaatgctcgacggtctgatggccggcgcggaccgc
gatctggtcaaggtctgggagaagtacaacagcaagcgtttcgcgaacgtcatgctgaag
accaagaccaccgcggccgaagcgaaagacgacggcatctacgtgtcgttcgaaggcgag
aaggccccggccgaagcgcagcgttatgacctcgtgctggtcgctgtcggccgttcgccg
aatggcaagaagatcggcgcggacaaggccggcgttgcggtgacggagcgcggcttcatc
gacgtcgacaagcagatgcgcaccaatgtgccgcacatcttcgcgatcggcgatatcgtc
ggtcagccgatgctcgcgcacaaggcggtgcacgaaggccacgtcgcagcggaagccgcg
catggcgagaaggcatacttcgacgcgctgcagattccgtcggtggcctacaccgatccg
gaagtggcgtgggccggcaagaccgaagaccagttgaaggccgaaggcgtcaagtacggc
aaggcggtgttcccgtgggccgcttccggccgggcgatcgccaatggccgcgacgaaggc
ttcacgaagctgctgttcgacgaggaaacgcatcgcgtgatcggcggcggcatcgtcggc
ctgaacgcgggcgacctgatcagcgaagtctgtctcgccgtcgagatgggcgcggatgca
acggatatcggcaagacgatccatccgcatccgacgctcggcgaatcgatcggcatggcc
gccgagctgtacgaaggcgtctgcaccgacttgccgccgcagaaaaagaagtaa

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