Paraburkholderia ginsengisoli: I6I06_01720
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Entry
I6I06_01720 CDS
T07246
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00541
Biosynthesis of various nucleotide sugars
pgis01100
Metabolic pathways
pgis01250
Biosynthesis of nucleotide sugars
Module
pgis_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
I6I06_01720 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgis01005
]
I6I06_01720 (kdsA)
Enzymes [BR:
pgis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
I6I06_01720 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pgis01005
]
Lipid A
I6I06_01720 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QQC64248
UniProt:
A0A7T4T989
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All DBs
Position
1:391687..392541
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AA seq
284 aa
AA seq
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MKLGDFEIGLDKPFFLIAGTCVVESEQMTIDTAGRLKEICAKLNIPFIYKSSYDKANRSS
GKSFRGLGMDEGLRILSEVKRQLGLPVLTDVHAEHEIEQVASVVDVLQTPAFLCRQTDFI
HACARSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVS
DMRSLAIMRETNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVAVGVAGLFMETH
PNPAQAKSDGPNAVPLNRMADLLETLVTLDQAVKRAPFLESDFN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgggcgatttcgaaatcggactcgacaagccgtttttcctgatcgcgggcacc
tgtgtcgtcgaatccgaacagatgacgatcgacacggccggccgcctgaaggaaatctgc
gcgaagctgaacattccgttcatctacaaatcgtcgtacgacaaagccaatcgcagcagc
ggcaagtcgttccgcggtctgggcatggacgaaggtttgcgcatcctgtcggaagtgaag
cgtcagctcggtctgccggtgctgaccgacgttcacgccgagcacgaaatcgaacaggtg
gcgtcggtggtcgacgtgctgcaaacgccggctttcctgtgccgtcaaaccgacttcatt
cacgcttgcgcgcgttcgggcaaaccggtcaacatcaagaaaggccagtttctcgcgccg
cacgacatgaagaacgtgatcgacaaggcgcgtgacgccgcgcgtgaagccggtctgtcg
gaagaccgtttcatggcgtgcgagcgcggtgtgtcgttcggttataacaacctcgtgtcg
gacatgcgatcgcttgcgatcatgcgcgaaaccaatgcgccggtcgtgttcgacgcgacg
cactcggtgcagttgcccggcgggcagggcacgagctcgggcggtcagcgcgaattcgtg
ccggtgctggcgcgtgccgcggtggcggtgggcgtcgccggcctcttcatggaaacgcat
ccgaatccggcgcaggccaaatcggacggcccgaacgccgtgccgctcaaccgcatggcc
gacctgctcgagacgctggtaacgctcgaccaggccgtcaagcgcgcgccgttcctcgaa
agcgatttcaactga
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