Paraburkholderia ginsengisoli: I6I06_02175
Help
Entry
I6I06_02175 CDS
T07246
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
pgis
Paraburkholderia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pgis00536
]
I6I06_02175
Glycosaminoglycan binding proteins [BR:
pgis00536
]
Heparan sulfate / Heparin
Microbial pathogens
I6I06_02175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
ESPR
Motif
Other DBs
NCBI-ProteinID:
QQC64327
UniProt:
A0A7T4N333
LinkDB
All DBs
Position
1:492897..501917
Genome browser
AA seq
3006 aa
AA seq
DB search
MNKIFRLVYSRRWGMLVAVAETATGTGKADSGEAGGHRPARRISLFAMRHAAFAALALFG
LAPVISDAQIVPSGAHAPSAISTANGLPQVNVNKPSGAGVSLNTYSQFDVSKSGAILNNS
PVNVNTQLGGMISGNPNYGANDAAKIIVNQVNSNNPSLLRGYVEVAGAKTAAVVIANSSG
LVVDGGGFINTSKGILTTGNPLIDGSGNLTGFNVTSGSITVQGGGLNASNIDEVDLLARA
VQVNAAIYANALNVTTGSNNIDYASLTPTPVAGSGAPPAVSIDVSQLGGMYANRIVLTSN
EYGVGVANAGTIAAQAGDLTLTTAGQLVQSGTMTATGNVGVNAASVQNSGTVYAQQNTTI
GSTGAVTNSGTLAAQQNTAINAGSLASTGILGAGVNNDGSLGNSGDLNVSTSGQLTATGE
NVAGGNASLSGSGVNLAGSETAANGNVSLTANAGDLNLAGATTSAGGSVVANAAGTLDND
NGSLAGGSVALNAGNLSNQNGDISSQGTLVAQASGQIANQGGSMVSQGAMQVSGGAIANN
QGTMQSGAGLSVSGTSLDNTAGRITSLNGDGLSVTTTGALTNAAGTTATGAQGGVIGGNG
TVTLQGGTVANHGVVSAQTNLQVTGQSVDNSGGSLGASGNTTVNAGSKLINSGGSITAGQ
TVSESATTLDNSSGTTQAAQVSLNATNLVNHAGTITQTGSGPMTVAVSSTLDNSAGGTIQ
TNSADLSLTPATLDNDGGTIVHAGTGTLTLDAGNGAGSISNANGTIQSNGKVVAEGSSFN
NAAGLVLGQTGVTATVGGALNNTNGKLLSNADLSLAIGSLNNNGGEVGAASNETIQSGSM
TNSGGSIVAPDLALSIGSTLDNSGGDIEANQLALGATDLLNHGGTITQYGASPMSVNVSN
TLDNSNGGTLQTNSTDLTLAPATLDNDGGTITHAGTGTLTIAPGNGAGSISNVGGKIITA
GQIAAQAGSLNNATGVLAAQGNIAANVAGNINNTQGAVRSLGSLSLAGGGSLTNTNGQVQ
SGTGAAGDTSTLGVQAASIDNTNGLVSNLGTGNTTVQGGSQIINSGGVVTGNGNVAVDTA
ALSNTQGGQVSGASVDVQANTIDNSSGVIGSFTGPTGDVAITTTGAITNTNGQIGATHNL
TVDAATLTGGGAYSAANDVAINIQGDFAPTAGFAFNAGHDLSFTLPGTFANGGALEATDN
LDINASDIANSGAIMAGGTLTTHSNTLENTGAIVGGSVSLNATQSVTNVGPTALIGATDS
NGLLEILAPDIENRDDTTMTDTQATTAIYGLGKVVLAGGKDASGNYTNANLIRNQSALIQ
SSGDMGLYANQVTNTRRVMTTDGAYVEPLDASSPYIQQFGISLSGCAAANMAACGPGNPK
VMGLQFNPNASDYDPAAIAAVQAQPGGMPIEPPHGGQWNSTYQYTTYTGVALANLITGIS
PQAQIIAGGNLDASNVGTFQNYWSAVAAAGNIAAPVLLDQNSWRGQLAPGVQVTYSGQYH
YDNYDNTEYNWQLPFGNATFVTSNPGGYQVAPADIRTYALPSYESTFVAGGTLSGTGVNI
DNTAGNAGVPSLGLVPGQSLGGVTVGGVSGSAGGSKGGATSVNSGPGLVNPVIASATAVN
VLSNLTIPQGGLFHRDTAPNAPYLIETNPAFTSQKSFISSNYYLQQLGLNPQSVEKRLGD
GLYEQQLVQNEITSLTGKAVLGPYTDVQSMYEALMAAGASLAESLNLPLGMALSPDQVAA
LTTNVVIMQTEVVDGQSVLVPVVYLAKASQQNMNGPLIAATDIDLQNAQTFNNSGTVQAS
NTLSIQGQQINNAFGTLQSGGLMSLATTGNVDLTSATVNAGSLALNAGGDLILNTAANTV
NQVSATGATRTTTTLGPIANLNVTGNAAIVTGGNFEQNAGNLNVGGNLGMAVGGNYDLGS
VQTGEHKVVAGANGVSNTDVNQTTGSSVKVGGVSQIGVGGNLSATGANIDLGGGGTVVAK
GDVTLQAAKATSTVDSNSSGSDSHGSYSESLHTSADTLTGTTLNSGNSLTVASGNDINVT
GSTINLDQGTATLAAANNVNIGAATATYVDNSQEQHSHSNVVSGKEVSSSSATTTTLSQG
SMISADGVSISSGKDINVAGSTIVGTNDVALSATHDVNITTTQNTQQSSSTYQETRTGLG
TSGLTVTVGTNKLATTDQESSVTNNGSVVGSLNGNLSIQAGNTLHVTDSDLVAAQNITGT
AANVIIDSATDTSHTSHTQQTSSSGLTIGLSGSVGDAINNAYAQGQALASGNSNGRAEAL
HGIAAAGDAAMAGMGAAGVMGGATGPNAPSIGVQVSIGSSKSQSQSSEDQTTQHGSNVQA
GGTATFVATGDGTAGSGNLTIAGSNVSANDVVLAAKNQVNIVNTTNTDVTQSSNSSSSAS
VGVSYGTQGFGVSASMSNAHGDANSNAAIQNASHVNGTNSVTVVSGGDTNIIGSQVNGGQ
VAASVGGNLNIQSVQDTTVSTAHQSSVGGGFSISQGGGSASFSAQNGHADSNYAQVNEQA
GINAGNGGFDVNVKGNTNLTGAVISSTADASKNSLTTGTLTYSDIQNQSHYDATSNGISA
GVGVGSTGKAVGPGSVSNSGSVAPMMSQNASGDQSSTTRSAVSAGSINITNQGAQTQDVA
GLSRDTTNTNGTVSATPDVNNLLSQQADTIQAAQAAGQVVAQGIGMYADHERATATDKAT
ADAWDEGGNNRAILQAAGGALIGGLGGGSIFTAVGGAAGAAIASKAAKGIADIENGVTLG
TGSQVIGNIAGNIAAGLGGALVGGTAGAATGSAVQLYNQSMDDEAQLTGASKSSNPFSQS
PVDLVLQGIRNGLGAILGMGGGEPPTTSAQGVLVNGAGQATQGAANSLPANALLSDSGNR
PTPRQSELDETADQSGVSTPQVSYKGQDQVPYGTAGSVRPDLVSNDGTFSTEVKNYNIAT
NSSGLINNVANQAIQRADNLPDGMQQQVVIDIRGQTVSDVQKTAIIQGIVQKSNGIISPT
SIRFKQ
NT seq
9021 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagattttcaggctggtatacagccgacgctggggcatgctggtagctgttgca
gaaaccgcgaccggaacgggcaaggcagattcgggtgaggccggcggtcaccgcccggca
cgacgcatttcattgtttgcgatgcgccatgcggcctttgccgcgctcgcgctgtttggc
cttgcgccggtgatttccgatgcgcagatcgtaccatcgggcgcgcacgcgccgagcgct
atcagtacggcaaatggcttgccccaggttaacgtgaacaagccctcgggtgctggtgta
tcgcttaacacatattcacaatttgacgtaagcaaaagcggcgcgattctgaacaattcg
cccgtcaatgtgaatacgcaactcgggggcatgatatccggcaacccgaactacggagcg
aacgacgccgcgaagattatcgttaatcaggtcaacagcaacaacccctcgttattgaga
gggtatgtggaagttgcgggcgcgaagaccgccgctgtcgtcatagcaaattcttccggc
ctggtcgtcgacggcggcggctttatcaatacgtcgaaagggattttaacgactggcaat
ccgctgatcgacggtagcggaaacctgaccggctttaacgtaacgagtggctcgattact
gtccagggcgggggcctcaatgcctcaaatatcgatgaggttgaccttctggcgcgtgcc
gtacaggtcaacgcggcgatctatgcgaatgccctgaacgtcacaaccggttcgaacaat
atcgactatgcgagcctgacgccgacaccggtcgcaggtagcggagcgccccccgccgtc
tctatcgacgtctcgcagcttggcggaatgtatgcgaaccgcatagttttgacgagcaac
gaatacggcgtcggtgtggcaaatgccggcacgattgccgcgcaggctggcgatctgacg
ctgacgactgcggggcaacttgtccagtcgggcacgatgaccgcgacgggcaacgtcggc
gtcaacgcggcaagcgttcagaattccgggaccgtctacgcgcagcagaatactaccatc
ggctcgacgggcgcggtgaccaatagcgggacccttgcggcacaacagaacaccgccatt
aatgccgggtcccttgcgtcgaccggtatcctcggcgcgggcgtcaataacgacggctcg
ctcggcaactcgggcgacctcaatgtttcgacgagcgggcagctcactgcgaccggcgag
aacgtggcaggcggcaatgcgtcgctctcgggtagcggcgtcaatctcgcggggagcgag
accgcggcgaacggtaacgtctcgctcacggcgaacgcgggcgacctgaacctcgcgggc
gcgacgacgagcgctggcggctcggtcgtggcgaatgcagcgggtacgctcgacaatgac
aacggctcactggcgggcggtagcgtcgcgctcaacgcaggcaacctgtcgaaccagaac
ggtgatatttcgtcgcaaggcacgctcgtcgcgcaggcatccggtcagatcgcgaaccag
ggcggttcgatggtctcgcagggcgcgatgcaggtcagcggcggcgccatcgcgaacaat
caggggaccatgcaaagcggtgccggtttgtcggtgtcgggaacatcgctcgacaatacc
gcaggccgcattacgtcactgaacggcgacggcctctcggtcacgacgacaggcgcgttg
acgaacgcggcgggtacgaccgcaaccggcgcacagggcggcgtcatcggcggcaatggc
acggtgacgctgcaaggcgggaccgtcgccaaccacggcgtcgtgtctgcgcagacgaac
cttcaggtgaccggacaatcggtcgacaacagcggcggctcgctcggcgcgtcgggcaat
acgacggtgaatgccggttcgaaactgatcaatagcggcggctcgattacggcaggccag
acggtcagcgagagcgcgacgacgctcgacaacagttcgggcacgacgcaggccgcgcag
gtctcgctcaacgcgacaaaccttgttaatcacgcgggcacgattacgcaaacgggcagc
ggcccgatgaccgtcgcggtgtcgtccaccctcgacaattcggcgggcggcacgatccag
acaaacagtgcagaccttagcctcacacccgctacgctcgacaacgacggcgggaccatt
gttcacgcaggcaccgggacgctgacgctcgatgcgggcaacggcgcaggatcgatctcg
aacgcgaacgggaccatccagagcaacggcaaggtcgtcgccgagggcagctcgttcaac
aatgcggcgggcctcgttctcggccagacgggcgtgaccgcaaccgtcggcggcgcgctg
aacaatacgaacggcaaactgctctcgaatgccgatctgagcctcgcgatcggatcgttg
aacaataacggcggcgaggtcggcgcggcttcgaatgagacaatccagagcggatcgatg
accaatagcggcggctcgatcgtcgcaccggatctcgcgctctcgatcggctccacgctc
gacaacagcggcggcgatatcgaggcgaaccagctcgcgctcggcgcgacggacctcctc
aatcacggcgggacgatcacgcagtatggcgcgtcgccgatgagcgtcaacgtcagcaat
acgctcgacaactcgaacggcggcaccctccagacgaacagcacggacctgacgcttgcc
cctgccacgctcgataacgacggcggcacgattacgcatgccggaacaggcacgctgacg
attgcaccgggtaacggtgctggctctatctcgaacgttggcggaaagatcatcacggcc
ggccagattgcggcgcaggccgggagtctgaacaatgcgaccggcgtattggccgcgcag
ggcaatatcgcggcgaacgtcgcgggcaatatcaacaatacgcagggggcggtacgctcg
ctcgggtcgctttcgcttgcgggcggcggctcgctcacgaacacgaacggccaggtccag
tccggtacgggcgcagcgggcgatacgagtacgctcggcgttcaggccgcctccatcgac
aacacgaacggcctcgtcagcaacctcgggacaggcaatacaaccgtccagggtggtagc
cagatcatcaacagcggcggcgtcgtgacgggcaacggcaacgtcgcggtcgataccgcc
gcgctctcgaacacgcagggcggccaggtcagcggcgcaagcgtcgacgtccaggcgaat
accatcgacaacagcagcggcgtgattggcagtttcaccggtccgaccggtgacgttgcg
atcacgacgaccggcgcgatcacgaacacgaacggccagatcggcgcaacccataacctg
accgtcgacgcggcgacactgacgggcggcggcgcctatagcgcagcgaacgacgtcgcg
atcaacattcagggcgactttgcgccgaccgccggtttcgcgttcaacgccggtcacgac
ctttcctttacgctccccggcacgttcgcgaatggcggcgcgcttgaggcgaccgacaat
ctcgacattaacgcgagcgatattgccaacagtggcgcgatcatggcgggcggtacgctg
acgacgcactcgaacacgctggagaatacgggggcgatcgttggtggtagcgtctcgctc
aatgcgacgcaatccgtcacgaacgtcggcccgactgcgctgatcggcgcgaccgacagt
aacggcctgctcgaaatcctcgcacccgatatcgagaaccgcgacgatacgaccatgacc
gatacgcaggcgacgaccgcgatttatggtctcggcaaggtcgtgctggcaggcggcaag
gatgcgagcggcaactatacgaacgcgaatctgatccgcaaccagtcggcgctgatccag
tcctcgggcgacatggggttgtacgcgaaccaggtcacgaacacgcggcgcgtgatgaca
actgacggggcctacgtggaaccgctcgatgcgagttcaccgtacatccagcagttcggc
atcagcttgtctggctgcgcggccgctaacatggcggcatgcggcccgggcaatccgaag
gtcatgggcctccagttcaatccgaatgcctctgactacgatcccgccgccatcgctgcg
gtgcaggcccagccaggcggcatgccgatcgagccgccgcacggcggccagtggaacagc
acataccagtacacgacctatacgggcgtggcactcgcgaacctgattacgggcatcagt
ccacaggcgcagatcatcgccggaggcaacctcgatgcgtcgaacgtcggcacgttccag
aactactggagcgccgttgctgcggctggcaacatcgccgcacccgtgttgctcgaccag
aatagctggcgcgggcagcttgcgcccggcgtgcaggtgacctattccggccagtatcac
tacgacaactacgacaacaccgaatacaactggcaactgccgttcggcaatgccaccttc
gtgacctccaatccgggcggctaccaggtcgcgccggctgacatccgcacctatgcgttg
cccagctacgagtcgaccttcgtcgcgggcggcacgctgtccggtaccggcgtcaatatc
gacaatacggcgggtaatgcgggcgttccttcgctcggtcttgttcccggccagtcgctg
ggcggcgtgaccgtcggcggggtcagcggcagcgcgggcgggtcgaagggcggagccact
tcggtcaacagtggcccggggctcgttaatcccgtcatcgcgagcgcgacggcggtcaat
gttctgagcaacctgacgattccccagggtggcctgttccaccgggataccgcgccgaac
gcgccgtacctgatcgagacgaacccggcctttacgagccagaagtcgttcatctcaagc
aactactatctccagcagctcgggctgaatccgcagagcgtcgagaagcgcctcggcgac
ggcctgtacgagcagcagctcgtacagaacgagattacctcgctgaccggcaaggccgta
ctcggcccctacaccgacgtccagtcgatgtacgaagcgctcatggccgcgggtgcgtcg
ctcgccgagtcgcttaacctgccgcttggcatggcgctctcgcccgaccaggtcgcggcg
ctcacgaccaacgtcgtcatcatgcagacggaggtcgttgacgggcaatccgtgctggtg
ccggtggtctatctcgcgaaggcgagccagcagaacatgaacggcccgctgatcgcggcg
accgacatcgatctgcagaacgcgcagaccttcaataacagcgggacggtgcaggcaagc
aatacgctctcgattcagggtcagcagatcaacaacgcgttcggtacgctgcaaagcggc
ggcctcatgtcgctcgcgacgacgggcaatgtcgacctgacctcggccaccgtgaacgcc
ggcagtctcgcgctgaatgcgggcggcgacctgatcctcaatacggcggcgaataccgtc
aaccaggtgagcgcgacgggcgcgacacggaccacgacgacgctcggccccattgcgaac
ctgaacgtgacgggtaacgcggccatcgtgacgggcggcaacttcgagcagaacgcaggc
aacctgaacgtgggcggcaacctcggcatggccgtgggtggcaactacgatctcggctcg
gtgcagaccggcgagcacaaggtggtcgcgggcgcgaacggcgtgtcgaataccgacgtc
aaccagacaactggcagttctgtgaaggtgggcggcgtctcgcagatcggcgtcggcggc
aacctgagcgcgacgggcgcgaatatcgatctcggcggcggcgggacggtcgtagcgaag
ggcgacgtcacgcttcaggcggcgaaggcgacctcgaccgtcgacagcaacagttcgggt
agcgacagtcatggcagctattcggaatcgttgcacacctccgccgatacgttgacgggc
acgacgctcaattcaggcaattcactgaccgtcgcatcgggcaacgatatcaacgtcacc
ggcagtacgatcaacctcgaccaggggacggcgacgctcgcggcagcgaacaacgtcaat
atcggtgcagccaccgcgacctatgtcgacaattcgcaggaacagcatagccatagcaac
gtggtaagcggcaaggaagtatcgagttcgagcgctacgacgacgacgctttcgcagggc
agcatgatttcggcggacggcgtgtcgatctcaagcggcaaggatatcaacgtcgcaggt
agcacgattgtcggcacgaacgatgttgccctgagcgcgacgcacgacgtgaacatcacg
acgacgcaaaatacccagcagtcgtcgagcacttaccaggagacgcgcacgggcctcgga
acaagtggcttgacggtgacggtcggcaccaacaagctcgccacgaccgatcaggaatcg
agcgtcacgaacaacgggagcgtggtcggttcgctgaacggcaacctgtcgatccaggcg
ggcaacaccctgcacgtcacggatagtgacctcgtggccgcgcagaacatcaccggtacg
gcggcgaacgtcatcattgattccgcgaccgataccagccacacgagccacacccagcag
actagcagcagcggtctgaccatcggcctttcgggcagcgtcggggatgcgatcaacaac
gcctatgcgcaggggcaggcgctcgcgagcggcaacagcaacgggcgcgccgaagcgttg
catgggattgcggcggctggcgatgccgcaatggccggtatgggagcggcgggtgtgatg
ggcggcgccacagggccgaacgcgccgagtatcggcgtgcaggtcagcatcggttcgagc
aagagtcagagccagtcatccgaagaccagaccacccagcacggctcgaacgttcaggcg
ggcggcaccgccaccttcgtggcgaccggcgacggtacggctggcagtggcaacctgacc
atcgcgggttcgaatgtgagcgcgaacgatgtcgtgcttgcagcgaaaaaccaggtcaat
attgtcaacacgaccaataccgatgtcacgcaaagctcgaacagttcgagcagcgcgagt
gtaggggtgtcgtatggcacgcagggctttggcgtctcggcgtcgatgtcgaatgcgcat
ggcgacgcgaacagcaatgcggcgattcagaatgcctcgcacgtcaacggcacgaacagt
gttaccgtggtttcgggcggcgacaccaatatcatcggctcgcaggtcaacggcggccag
gtggcggcgagcgtcggcggcaacctgaatatccagagcgtgcaggatacgacggttagt
actgcacatcagagcagcgtgggcggtggcttcagcatcagccagggcggcggcagcgcg
agctttagtgcacagaacggccacgccgacagcaactatgcgcaggtcaacgagcaggcg
ggcatcaatgctggtaacggcggcttcgatgtcaacgtcaagggcaatacgaacctgacg
ggtgcggtgatttccagcaccgcggatgcgtcgaagaacagcctcaccaccggcacgctg
acctacagcgacatccagaaccagtcgcactacgacgcgacgagcaacggcatcagcgcg
ggtgtcggcgtgggtagcaccggcaaggcagtcggcccaggctcggtgagtaattcgggc
agcgtggcgccgatgatgtcgcagaacgccagcggcgaccagagttcgaccacgcgcagc
gcggtcagcgcgggttcgatcaacattacgaaccaaggcgcgcagactcaggatgtcgcg
ggcctgagccgcgataccacgaacaccaacggtacggtgtcggcaacgcccgacgtgaac
aacctgctgtcgcagcaggccgacacgatacaggctgcccaggcggcaggccaggtagtg
gcacagggcatcggcatgtacgcggaccatgagcgcgctacagccacggataaggctacg
gcggatgcgtgggacgaaggcggaaacaaccgcgcaatattgcaggcagcgggcggcgcg
ctgattggtggacttgggggcggtagtatcttcacggcggttggtggtgccgcaggcgcg
gccattgcctcgaaggctgccaagggtatagcggacattgagaacggtgtaacgctaggt
actggctcgcaggtgatcggcaatatcgcaggcaacatagcggcggggcttggcggtgcc
ctcgttggcgggacggctggcgcggctaccggctcggctgtgcaactgtataaccagtcg
atggacgacgaggcgcagttgacgggagcaagcaagagcagcaacccgttttcacagtcg
cctgtggacctggttctgcagggcattcgcaacggcctgggtgcgattttgggcatgggc
ggtggtgagccgccgacaacgagtgcgcaaggtgtattggtaaatggggcgggacaggcg
acgcagggcgcggctaattccctgcccgccaacgctctcttgtctgacagtggcaatcgt
cccacgccccgtcagtcggaactggacgaaacggcggatcaaagcggagtttcgacaccc
caggtcagctataagggtcaagatcaagtaccctatggaacagccggtagcgtgcgtcct
gatctagtgtctaatgacgggacgttcagcacggaagttaagaattacaatatcgctacg
aattcgagtggcctaattaacaacgtcgcgaaccaagcgatccagcgggcggataacttg
cctgacgggatgcagcaacaggttgtgatcgacatacgtggccaaacggtaagtgatgtg
caaaagacggcgattatccaagggattgtgcagaagtccaatgggatcatcagcccaaca
tctataaggtttaagcaatga
DBGET
integrated database retrieval system
