Paraburkholderia ginsengisoli: I6I06_02725
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Entry
I6I06_02725 CDS
T07246
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6I06_02725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgis03400
]
I6I06_02725
Enzymes [BR:
pgis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
I6I06_02725
DNA repair and recombination proteins [BR:
pgis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I6I06_02725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QQC64413
UniProt:
A0A7T4T9E7
LinkDB
All DBs
Position
1:608007..609254
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AA seq
415 aa
AA seq
DB search
MALHESVLEEFGLTTLWVRRGMAVQQPVEDAAAQSGRVDDARDVVAGASAALAQDASRSA
MRAGETRPAASASMTDERRAPGRDEPATASAGAREPFDDRAPSARASDPLRSAQESERGE
RRVAQPAQAVAQERQPMSAETRQQPSPRPQPQPEKAQPQQLDPAEPFQSAAQREPATQQP
TGPAEPPAYDAPPDDDFAWFDDLPAQAPSEARADTPALPAIATLDWDALSERVADCRLCR
LCEKRTNTVFGVGDRGADWMLIGEAPGENEDRLGEPFVGQAGKLLDNMLQSLTLARDTNV
YIANVIKCRPPGNRNPEPDEVLRCEPYLQRQVALVKPKLIVAMGRFAAQSLLKTEASISA
LRGRVHEYEGVPVIVTYHPAYLLRRLPDKAKAWADLCLARDTWRAAGGTPSNAGE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcatgaatcggtactggaggagttcgggctgacgacgctgtgggtgcgtcgc
gggatggcggtgcagcagccggtcgaggacgccgccgcgcagagcggccgtgtcgacgat
gcgcgcgatgtggtggcgggggcctcggccgcacttgcgcaggatgcgtcgcgctccgcg
atgcgggcgggcgaaacgcggccagccgcttccgcgtcgatgactgacgaacgccgcgcg
ccgggtcgcgacgagccggcgacagcgtctgctggcgcgcgcgagccattcgatgatcgc
gcgccgtcggcgcgcgcgagcgacccgttgcgatccgcgcaggagagcgagcgcggcgag
cgtcgtgtggcgcagccagctcaggcggtcgcgcaggaacggcaacccatgtccgccgaa
acgcgtcagcagccgtccccgcggccccagccgcaacccgaaaaagcccaaccgcagcag
ctcgaccccgccgagccgttccaatcggcagcgcagcgtgagccggccacgcagcaaccc
accggtccggccgagccgcccgcctacgacgccccgcccgacgacgatttcgcctggttc
gacgatttgcctgcgcaagcgccgtcggaagctcgcgccgacacgcccgcattgccggcc
atcgctacgctcgactgggacgcgctgagcgagcgcgtcgccgattgccggctgtgccgt
ctgtgcgagaagcgcaccaacaccgtgttcggcgtcggcgatcgcggggccgactggatg
ctgatcggcgaagcgccgggcgagaacgaagaccgcctgggcgagccgttcgtcggccag
gccggcaagctgctcgacaacatgctgcagtcgctgacgcttgcgcgcgataccaacgtc
tacatcgcgaacgtgatcaagtgccgcccgccgggcaaccgcaatcccgagccggacgaa
gtcttgcgttgcgagccgtatttgcaacgccaggtggcgctggtcaagccgaagctgatc
gtcgcgatgggccgcttcgccgcgcaaagtctgctgaagactgaagcgagcatttcggcg
ctgcgtggccgtgtgcatgagtacgaaggcgtgccggtcatcgtcacctatcaccccgcg
tatctgctgcgccgtctgcccgacaaggcgaaggcgtgggccgacctgtgcctcgcgcgc
gacacgtggcgcgcggcgggcggcacgccgtcgaacgcgggcgagtga
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