Paraburkholderia ginsengisoli: I6I06_02830
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Entry
I6I06_02830 CDS
T07246
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pgis
Paraburkholderia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgis03009
]
I6I06_02830
Enzymes [BR:
pgis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
I6I06_02830
Ribosome biogenesis [BR:
pgis03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I6I06_02830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
QQC64433
UniProt:
A0A7T4N397
LinkDB
All DBs
Position
1:complement(635978..638044)
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AA seq
688 aa
AA seq
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MRVKLTAKHPRPASSERAPVRTGSTSARKPTRPAGPKPSTAGFSGARGEGAGAAGGGKRP
AGGKPAGGGARAPRAEGSFSRERDAGAPRGPRGAPSDRPPRREGAGGAPRRFEGAGGGER
GERAPRRAEGAGDRGERAPRRFEGAGDRSERAPRRFEGAGDRGERAPRRAEGAGDRGERA
PRRFEGAGDRGERAPRRFEGAGDRGERTPRRFEGAGDRGDRAPRRPEGAGDRSERTPRSV
GDRPPRRDDGERRPFSGARPGAGRPSDAGARGERPERRERDASNRPRFGSDRGAPQERRG
GERGPRSDSAPRRFEGERGASERGERSFAKPVKSGYADRSDRPAHAPRDDRGDRGERAPA
RREFAARPSRDGERSERPARGFDKNLPSAPRRFGDDRPARADKPRGPASTARAERRDAER
DADATPRTPRRDYEDAPGMLRLSKLMSELGLCSRREADEWIEKGWVLVDGERVDTLGTKV
RPDQRIEIDPAAEAAQASQVTVLIHKPVGLVSGQAEDGYQPAITLVTPENRWEGDHSEIR
FSVAHLRQLAPAGRLDIDSTGLLVLTQDGRVAKQLIGGHSEIDKEYLVRVAFGEHTVDVE
SHFPPESLELLRHGLSLDDVPLKPAQVEWQNGEQLRFVLREGKKRQIRRMCELVGLEVIG
LKRVRMGRVMLGALPPGQWRYLSADEQF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtcaaattaacagccaagcacccgcggccggcttcgtccgaacgcgcccctgtc
cgtaccggtagcacgtcggcgcgtaagccgacgcgcccggcgggaccgaaaccgtcgacg
gcgggtttcagcggcgcgcggggtgaaggcgctggcgcagcgggcggcggcaagcggccg
gcgggcggtaagcccgcgggtggcggcgcacgcgcgccgcgcgctgaaggatcgttttcg
cgcgagcgggatgcgggcgcgccgcgcggaccgcgcggcgcgccgtcggatcggccgcca
cgccgcgaaggggccggcggtgcgccgcgcaggttcgaaggtgcgggcggcggcgagcgt
ggtgaacgtgctccgcgtcgcgctgaaggtgcgggcgatcgcggtgaacgcgctccgcgt
cggttcgaaggtgcaggtgatcgcagtgagcgtgcgccgcgccgcttcgaaggcgcgggt
gatcgtggtgaacgtgctccgcgtcgcgctgaaggtgccggcgatcgcggtgaacgtgcg
ccgcgtcggttcgaaggtgcaggtgatcgtggcgaacgcgcaccccgtcgctttgaaggt
gccggtgatcgcggtgagcgcacaccccgtcgcttcgaaggtgcaggcgatcgtggcgac
cgtgccccccgccgcccggaaggtgcgggcgatcgcagcgaacgcaccccgcgcagtgtc
ggcgaccgcccgccgcgccgcgacgacggcgaacgccgtccgttcagcggtgcgcgtccg
ggcgccggccgtccgtcggacgccggagcgcgtggcgaacgcccggagcgtcgtgaacgc
gacgcctccaatcgtccccgtttcggcagcgaccgcggcgcgccgcaagagcgccgtggc
ggcgagcgcggcccgcgcagcgacagcgcgccgcgccgtttcgaaggcgaacgcggcgcg
tccgaacgcggcgaacgcagcttcgcaaaaccggtgaaaagcggctacgccgatcgctcg
gaccgtccggcacacgccccgcgtgacgaccgtggcgaccggggcgagcgcgcgccggcc
aggcgtgaatttgccgcccgcccgtcacgcgacggtgagcgcagcgaacgcccggcccgc
ggcttcgacaaaaacctgccgtccgcgccgcgccgctttggcgacgaccgtcccgcccgc
gccgacaagccgcgcggccctgcatcgacggcccgcgccgaacgccgcgatgccgagcgc
gatgccgatgccacgccgcgcaccccgcgtcgcgattacgaagacgcgccgggtatgctg
cgtctgtccaagctgatgtccgaactcggcctgtgctcgcgtcgcgaagccgacgagtgg
atcgaaaaaggctgggtgctggtggacggcgaacgcgtcgacacgctcggcaccaaggtt
cgtccggatcagcgcatcgagattgacccggcagccgaagccgcgcaggcgagccaggtg
acggtgttgattcacaagccggtcggtctggtctccggccaggcggaggacggctatcag
ccggccatcacgctggtcacgccggaaaatcgctgggaaggcgaccattcggaaatccgt
ttctcggtcgcgcatctgcgccagcttgcgccggccggccggttggacatcgactcgacg
ggcctgctggtattgacgcaggacggccgcgtcgccaagcagttgatcggcggccattcg
gagatcgacaaggaatacctggtgcgcgtggcctttggcgagcacaccgtcgacgtcgaa
agccacttcccgcccgaaagcctcgaactgctgcgccacggcctgtcgctcgacgacgtg
ccgctgaaaccggcgcaagtggaatggcagaacggcgagcagttacgcttcgtgctgcgc
gaaggcaagaagcgccagattcgccggatgtgcgaactggtcggcctcgaagtgatcggc
ctgaagcgggtgcggatgggtcgcgtgatgctgggcgcgctgccgccgggccaatggcgc
tatctgtcggcggacgagcagttctga
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