Paraburkholderia ginsengisoli: I6I06_04670
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Entry
I6I06_04670 CDS
T07246
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pgis
Paraburkholderia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgis03009
]
I6I06_04670 (rimO)
Enzymes [BR:
pgis01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I6I06_04670 (rimO)
Ribosome biogenesis [BR:
pgis03009
]
Prokaryotic type
ribosomal protein modification factors
I6I06_04670 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QQC64775
UniProt:
A0A7T4T9Y8
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All DBs
Position
1:complement(1071830..1073227)
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AA seq
465 aa
AA seq
DB search
MSATPTIAPNAAPTAAPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVN
TCGFIDEAVQESLDAIGEALNENGKVIVTGCLGAKKSGSGSGLIEEVHPKVLAVTGPHAV
GEVMQHVHTHLPKPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLV
SRPVAEVMLEAENLFKGGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVGALG
ELAAQYGAWVRLHYVYPYPSVDEVIPMMAEGPYKGHVLPYLDVPFQHAHPEVLKRMKRPA
NAEKVMERVKAWREMCPDLTIRSTFIAGFPGETEEQFQTLLDFIREAELDRVGCFAYSPV
EGATANELDGALPDEVREERRARFMEVAEEVSAKRIAKKVGKTLKVLVDEINADGGIGRT
AADAPEIDGVVYIAPATKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacccccacgattgccccgaacgccgcgccgacggccgcgcccaaagtcggc
tttgtctcgctcggttgcccgaaagccctagtcgactccgagcagatcatcacccagctg
cgcgccgaaggttacgaaatttccggcacgtacgacggcgcggacctcgtggtcgtcaac
acctgcggctttatcgacgaagcggtgcaggaaagcctcgacgcgatcggcgaagcgctt
aacgagaacggcaaggtgatcgtcaccggctgcctcggcgcgaagaagagcggcagcggt
tcgggattgatcgaagaggtgcatccgaaggtgctggccgtaaccggcccgcacgcggtc
ggcgaagtgatgcagcacgtgcatacgcatctgccgaagccgcacgatccgttcgtcgat
ctcgtacccgccgcgggcatcaagctcacgccgcgccattacgcgtatctgaagatttcc
gaaggctgcaatcaccgctgcacgttctgcatcatcccgtcgatgcgcggcgacctcgtg
tcgcgtccggtcgccgaagtgatgctcgaagcggagaacctgttcaagggcggcgtgaag
gaactgctggtgatttcgcaggacacgagcgcatacggcgtcgacgtcaagtaccgcacg
ggcttctggaacggcaagccgatcaagacacgcatgaccgacctggtcggcgcactcggc
gaactggccgcgcaatacggcgcgtgggtgcgtctgcactacgtgtatccgtacccgagc
gtcgacgaagtgattccgatgatggccgaaggcccatacaagggccatgtgctgccgtat
ctcgacgtgccgttccagcacgcgcatcccgaggtgctgaagcgcatgaagcgtccggcc
aacgccgagaaagtgatggagcgcgtcaaggcatggcgcgagatgtgtccggacctgacg
atccgcagcacgttcatcgccggcttcccgggcgagacggaagagcaattccagacgctg
ctcgatttcatccgcgaggcggagctggatcgcgtcggctgctttgcgtattcgccggtc
gaaggcgcgacggctaacgaactcgacggcgcgttgcccgacgaagtgcgcgaagagcgt
cgtgcgcgcttcatggaggtggccgaggaagtgtcggcgaaacgcattgcgaagaaagtc
ggcaagacgctgaaggtgctggtcgacgagatcaacgccgacggtggcatcggccgtacc
gcggccgatgcgccggagatcgacggcgtcgtgtacattgctccggcgaccaaggcgtcc
aaacgctacaaggtcggcgacttcgtgtcggtgaagatcaccggcgccgacggtcacgac
ctgtggggcgaggtctaa
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