Paraburkholderia ginsengisoli: I6I06_05780
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Entry
I6I06_05780 CDS
T07246
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
pgis
Paraburkholderia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgis02000
]
I6I06_05780
Transporters [BR:
pgis02000
]
Other transporters
Pores ion channels [TC:
1
]
I6I06_05780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
DUF2171
Motif
Other DBs
NCBI-ProteinID:
QQC64980
UniProt:
A0A7T4T9H3
LinkDB
All DBs
Position
1:complement(1308916..1311606)
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AA seq
896 aa
AA seq
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MQSCPLRREAEATPSPGGQPATRAVLHFFSDPTASGAHAGVGLTARSALSRRPRTRIAAW
FGTWAAAMCVALILCAVGLPTSAQAAGAPTSTPVIPALQSLINSATATPAPAASGASAPD
AASAPSPASQAELARSLDSVIATLDNDRQRTALVTQLKKLRDVSQNVAPPAPAQPSPGLL
GAIASGIASFEADVHQGRTPVRYWGGRFNAAGNELYTIISGQGRESFGRVLFSMLAMLAG
WGACAGALIYLQHRLYRRFGVVMELHPNPTTRELLIFALRRVGPWIIAFVAALLFVRAMP
DALGRTLGMVVAYAIVAGAVFSAICLIMFSLFGSGHRRIAVRLLIDHARRLLFAVGVCGA
LGDAAVNYDVAHQLGSNLAALISTAANMTAAVLTGYFALAFRRPVAHLIRNRPYEQRNHH
KAATDAFDVLAALWHVPVLVLATASVVATLGGSGSSENVLQISVVTALLLVLAFFLSAIV
LRMTRPRSARARRRSPYLTRLLRFFGTLSTLFIWLFFFELAARLWGVSLAAVVEKNVAAR
GIAHAVTAIVATVFIAWLLWILVDTAITEALNPGGPRNKSRSPSMRARTMLPLVRNVLLV
SIMTIAGIVTAANLGINVTPLLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGDW
IDVDGGHAGTVEHLSIRTVRLRDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMAFSTD
VDHITQLIREVGADLMADFRYRREMLGPIEVWGLDRFDPNWMVVKGQIKTRPLQQWSVAR
AFNLQLKRKMDEAGIEIPVPQMRVYTSSKDSEGQPLRDDEMTGVIVPADAHVHAHQPVET
GAAGAASRGAHASAAAHAPLAVARDVSHEPRPAPPLTGTAPTPPQIPTAGEAGVKG
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcatgcccgttgcggcgtgaggccgaggctacgccgtcccccggcgggcagccg
gcgactcgcgccgtccttcattttttctccgacccgaccgcctccggcgcgcacgccggt
gtgggcctgactgcgcgctccgctttgtcgcggaggccgcgcacgcgcatcgccgcatgg
ttcggcacatgggccgccgcgatgtgcgtcgcgctgatcctctgcgccgtcgggctgccg
acctctgcccaagccgccggcgcgcccaccagcacgcccgtcatcccggccttgcagagc
ctgatcaatagcgcaacggcgacgcccgcacccgccgcatcgggcgcttcggccccggac
gcggcgtccgcgccgtcaccggcgagccaggcggaactggcgcgctcgctcgacagcgtg
atcgccacgctcgacaacgatcgccagcgcaccgcgctcgtcacccagttgaaaaagctg
cgcgacgtctcgcagaacgtcgcgccgcccgcgcccgcgcaaccgagccccggcctgctg
ggcgcgatcgcgtcgggcatcgcgtcgttcgaagccgacgtgcatcagggccgcacgccg
gtgcgctattggggcggccgcttcaatgcggccggcaacgagctgtacacgatcatctcg
gggcaggggcgcgagagcttcggccgcgtgctgttctcgatgctcgcgatgctcgccggc
tggggtgcctgcgccggtgcgctgatctatctgcaacaccggttgtaccgtcggttcggc
gtcgtgatggagctgcatccgaatccgaccacgcgcgagctgctgattttcgcgctgcgc
cgtgtcggtccgtggatcatcgcgttcgtcgcggcgctgctgttcgtgcgcgcgatgccc
gatgcgctcggccgcacgctcggcatggtggtggcctatgcgatcgtcgcgggcgcggtg
ttttcggcgatctgtctgatcatgttctcgctgttcggctcggggcatcggcgcatcgcg
gtgcgtctgctgatcgatcacgcgcggcgtttgctgttcgcggtcggcgtgtgcggcgcg
ctcggcgacgcggccgtcaattacgacgtcgcgcatcagctcggctcgaacctcgcggcg
ttgatctcgacggctgccaacatgacggccgcggtgctgaccggctatttcgcgctcgcg
tttcgccggccggtcgcgcatctgattcgcaaccggccgtacgagcagcgcaatcatcac
aaggccgcgaccgatgcattcgacgtgcttgccgcgctctggcacgtgcccgtgctggtg
ctggcgacggcgtcggtggtggcgacactcggcggctcgggttccagcgaaaacgtgctg
cagatttcggtggtgaccgcgctgttgctggtgctggcgtttttcctgtcggcgatcgtg
ctgcgcatgacgcggccgcgcagcgcgcgggcccggcgccgctcgccgtatctgacccgg
ctgctgcgctttttcggcacgctgtcgacgctcttcatctggctgttcttcttcgaactc
gcggcgcgtttgtggggcgtgtcgcttgcggcggtggtcgagaagaacgtcgccgcgcgc
ggcatcgcgcatgcggtgacggcgatcgtcgcgaccgtgttcatcgcgtggctgctgtgg
attctcgtcgacaccgccatcaccgaggcgctcaatccgggcggaccgcgcaacaagtca
cgcagtccgagcatgcgcgcgcgcacgatgctgccgctcgtgcgcaacgtgctgctcgtc
tccatcatgacgatcgcgggcatcgtcacggcggccaatctcggcatcaacgtcacgccg
ctgctggcgggcgcgggcgtgatcggtctcgcgatcggcttcggcgcgcagtcgctcgtg
accgacctgatcacgggcctgttcatcatcatcgaagatacgatttcggtgggcgactgg
atcgacgtggacggcggccatgcgggcaccgtcgagcatctgtcgatccgcaccgtgcgt
ctgcgcgacggccagggcgcgattcacgcgattccgttctcgcagatcaagatcgtgaag
aacctgtcgcgcgacttcgcctatgcggtgttcgaagtgcgaatggcgttctccaccgac
gtcgatcacatcacgcaactgattcgcgaagtcggcgccgatctgatggccgacttccgt
taccggcgcgaaatgctcggaccgatcgaggtgtggggcctcgaccgtttcgatccgaac
tggatggtcgtgaaagggcagatcaagacgcggccgctgcagcaatggagcgtggcgcgc
gcgttcaatctgcagctcaaacgcaagatggacgaagcggggatcgagattccggtcccg
cagatgcgggtctatacgtcgtcgaaggatagcgaggggcagcctttgcgggacgacgag
atgaccggagtcatcgtgcccgccgacgcgcatgtgcatgcacatcagccggtcgagacg
ggagcggcgggagcggcgtcgcggggggcgcatgcgtcggccgccgcgcatgcgccgctc
gcggtggcgcgcgatgtgtcgcacgagccgcgtccggcaccgccgttgaccggcaccgcg
ccgaccccgccgcagattccgactgccggcgaagcgggcgtgaaggggtaa
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