Paraburkholderia ginsengisoli: I6I06_06810
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Entry
I6I06_06810 CDS
T07246
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I06_06810 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgis03019
]
I6I06_06810 (pnp)
03016 Transfer RNA biogenesis [BR:
pgis03016
]
I6I06_06810 (pnp)
Enzymes [BR:
pgis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I6I06_06810 (pnp)
Messenger RNA biogenesis [BR:
pgis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6I06_06810 (pnp)
Transfer RNA biogenesis [BR:
pgis03016
]
Prokaryotic type
tRNA degradation factors
I6I06_06810 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
OB_PDCD11
KH-I_KHDC4-BBP
KH_KhpA-B
S1_TP0910
Motif
Other DBs
NCBI-ProteinID:
QQC65166
UniProt:
A0A7T4N4N3
LinkDB
All DBs
Position
1:complement(1552640..1554775)
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AA seq
711 aa
AA seq
DB search
MTMFNKIVKEFKWGQHNVRLETGEVARQASGAVIVDVEDTVVLATVVGAKTAKPGQDFFP
LTVDYLEKTYAAGKIPGGFFRREGRPSEGETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SLNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYINNEYVLNPTRPQMKESALDLI
VAGTERAVLMVESEAQQLSEEVMLGGVVFGHEQMQIAIDAIHDLVREGGKPEWDWQPAAK
NEPLIARVTELAQADLLAAYQIRDKQARSAKLKEVYAATSAKLEEDAAASGTPAADKATV
GNVLFDIEAKIVRTQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQNIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALAA
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
RFAVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMAEAKKRIENITLEVEVGQVYEGTVLKLLDFGAIVNILPGKDGLLHISE
IANERIKDINDYLKDGQQVKVKVIQTDEKGRVRLSAKALLNDAPQGEPTPQ
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgactatgttcaataagatcgtcaaagagttcaagtggggacaacataacgttcgcctc
gaaaccggcgaagtcgctcgtcaggcgagcggtgcggtgatcgtcgacgtcgaagacacc
gtcgtgctggcaaccgtggtcggcgcaaagaccgccaagccgggccaggacttcttcccg
ctgacggtcgactacctcgaaaagacctacgccgccggcaagatcccgggtggcttcttc
cgccgcgaaggccgtccgtcggaaggcgaaacgctgacctcgcgcctgatcgatcgaccg
ctgcgcccgctgttcccggaaggcttctacaacgaagtccaggtcgtgatccacgtcctg
tcgctgaacccggaaatccccgccgacattcccgcgctgatcggcgcgtcggcggcgctc
gccgtgtccggtctgccgttcaacggcccggtcggcgcagcacgcgtggcctacatcaac
aacgaatacgtgttgaacccgacgcgtccgcaaatgaaggaatcggcgctcgacctgatc
gtcgccggtacggaacgcgcggtgctgatggtggaatcggaagcgcagcaactgagcgaa
gaagtgatgctcggcggcgtggtgttcggccatgagcagatgcagatcgcgatcgacgcg
atccacgatctggtccgcgaaggcggcaagccggaatgggattggcaaccggcggcgaag
aacgagccgctgatcgcgcgcgtgacggaactggcgcaagccgacctgctcgcggcttac
cagattcgcgacaagcaggcgcgttcggccaagctgaaggaagtctacgcagcgacgtcg
gcgaagctggaagaagacgcagcggcaagcggcaccccggcggccgacaaggcaaccgtc
ggcaacgtgctgttcgacatcgaagcgaagatcgtccgcacgcagatcctgaacggcgag
ccgcgtatcgacggccgcgacacgcgcaccgtgcgcccgatcgaaatccgtaccggcgtg
ctgccgcgtacgcacggttcggcactgttcacgcgtggcgaaacgcaggcgctggtggtg
gcgacgctcggcacgaagggcgacgagcagaacatcgacgcgctcgaaggcgagtaccgc
gaacgtttcatgctccactacaacatgcctccgttcgcgaccggcgaaacgggccgcgtc
ggttcgccgaagcgccgtgaaatcggtcatggtcgcctggccaaacgcgcgctggccgcg
tgcctgccgagcgccgacgaattcggctactcgattcgcgtcgtgtcggaaatcaccgaa
tcgaacggttcgtcgtcgatggcttcggtgtgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggtatcgcgatgggcctgatcctcgaaggcaac
cgttttgccgtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggttgccggtacggaacaaggcgtaaccgcgctgcagatggacatcaagatccagggc
atcaccaaggaaatcatgcaggtcgccctcgcgcaagcgaaggaaggccgtatgcacatc
cttggcaagatgacctcggcggtgtcgggcgcgaacacgcaattgtcggagttcgcaccg
cgcatgatcaccatcaagatcaacccggaaaagatccgtgacgtgatcggcaagggtggt
tcggtgatccgcgcgctgacggaagaaaccggcacgacgatcgatatttcggacgacggc
gtcgtcaccatcgcaagcacgagcagcgaagggatggccgaagcgaagaagcgtatcgag
aacatcacgctggaagtcgaagtgggtcaggtgtacgaaggcaccgtgctcaagctgctc
gatttcggcgcgatcgtgaacatcctgccgggcaaggacggtctgttgcatatctccgaa
atcgccaacgagcgtatcaaggacatcaacgactacctgaaggacggccagcaggtgaag
gtcaaggtcatccagacggacgagaagggccgcgtgcgtttgtcggccaaggcgttgctg
aacgatgcgccgcaaggcgaaccgacgccgcagtaa
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