Paraburkholderia ginsengisoli: I6I06_07205
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Entry
I6I06_07205 CDS
T07246
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03030
DNA replication
pgis03430
Mismatch repair
pgis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6I06_07205 (dnaE)
03430 Mismatch repair
I6I06_07205 (dnaE)
03440 Homologous recombination
I6I06_07205 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgis03032
]
I6I06_07205 (dnaE)
03400 DNA repair and recombination proteins [BR:
pgis03400
]
I6I06_07205 (dnaE)
Enzymes [BR:
pgis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6I06_07205 (dnaE)
DNA replication proteins [BR:
pgis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6I06_07205 (dnaE)
DNA repair and recombination proteins [BR:
pgis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6I06_07205 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
HROB
Motif
Other DBs
NCBI-ProteinID:
QQC65236
UniProt:
A0A7T4N4S9
LinkDB
All DBs
Position
1:complement(1630259..1633828)
Genome browser
AA seq
1189 aa
AA seq
DB search
MSPMSDPRFVHLRVHSEFSIADGIVRLDDIVKAAAKDGQGALALTDLGNAFGLVRFYKEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEVE
AGWLESGLGEGLLALSGAQQGDVGLALAAGNVEAAKRNALHWAKVFPGGFYIELQRCGQP
GGEQYVQQAVTLAASLKLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRPKRFTS
EQYFRTQEEMTALFADIPSALANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQL
SKEGLEKRLEQLYPDEAERAAQRATYYERLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLIELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKQDWSLGQVPLDDPA
SFSVLKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVESVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAE
HRELFRQGAAKNGLTAEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCLTNKMAVLPPDVNLSAYRFEPVAEPDGKRSKTIRYGLG
AIKGSGQNAIEEILRAREEGPFIDIFDFCNRVDRRIVNRRTIEALIRAGAFDTLHANRAQ
LIASVSLAMEAAEQASANALQAGLFDMGDAPSQGHELVDEPEWPEKKKLQEEKAALGFYL
SGHLFDAYKDEVRRFVRQKIGELKEGRDKLVAGVIASLRTQMTQRGKMLIALLDDGTGQC
EVTVFNETFEAHKQLFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKV
QMNGNADALALRRVLEAHSAGKDEQAAAAPAASSRGGGGGGGRNGGGYGNDRQRQAVQIP
NGLAVQVVYRSENAQGEMRLGDAWRVKPTDELLAALRGEFAGSSIEIVY
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgtcagatccccgcttcgttcatctccgcgttcactccgaattctcgatt
gccgatggcatcgtgcgtcttgacgacatcgtcaaggccgcggccaaagacggtcagggc
gcgctcgccctcaccgatctcggcaacgccttcggcctcgtccgtttctacaaggaagcc
cgtggcaaaggggtcaaacccattgcgggctgcgacgtctggatcaccaatccggacgac
cgcgacaagccttcccgtctgctgttgctggtcaaggaccggcgcggctatctgaatctg
tgcgagctgctcagcaaggcatcgctcacgaaccagtatcgcggccgcgccgaagtcgag
gccggctggctcgaatcgggactcggcgaagggctgctcgcgttgtcgggcgcacaacag
ggtgacgtcggtctcgcgctcgcggccggcaacgtggaagcggcgaaacgcaacgcgctg
cattgggcaaaggtgtttcctggcggcttctatatcgaactgcaacgttgcggtcagccg
ggtggcgagcagtacgtgcagcaggcggtcacgctggcggcgtcgctgaaattgccggta
gtcgccacgcatccgatgcagttcatgacgcccgacgacttcaccgcgcacgaagcgcgc
gtgtgcatttccgaaggcgacattctcgcgaatccgcgccgtccgaagcgctttacgtcc
gagcagtatttccgcacgcaggaggaaatgaccgcgctgttcgcggacattccgtcggcg
ctcgccaacacggtcgagattgccaagcgctgcaatctcacgctcgaactcggcaagccg
aagctgccgctgttcccgacgcccgacggcatgtcgctcgacgactacctcgtgcagctg
tcgaaagagggccttgaaaagcgtctcgaacagctgtacccggacgaggccgagcgcgcc
gcacagcgcgccacgtattacgagcgcctcgaattcgagtgcggcacgatcatcaagatg
ggctttccgggctacttcctgatcgtcgcggacttcatcaactgggccaagaacaacggc
gtgccggtcggacctggccggggttcgggcgcgggttcgctggtcgcttacgcgcttggc
gtgacggatctcgacccgctgcgctacaacctgctgttcgaacgtttcctgaatccggaa
cgggtgtcgatgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatc
cagtacgtgaaggaaaagtacggcgcggacgccgtgtcgcagatcgcgacgttcggcacg
atggcggcgaaggcggcggtgcgcgacatcggccgcgtgctcgatctcggctacatgttc
acggacggcatcgccaagctgatcccgttcaagccaggcaagcacgtcacgatcgccgac
gcgatgaaggaagagccgctgttgcaggagcgcttcgacaacgaagacgaagtgcatcag
ctgatcgaactcgcgcagcgcgtcgaaggcctcacgcgtaacgtcggcatgcacgcgggc
ggcgtgctgatcgcgccgggcaagctgaccgatttctgcccgctgtacacgcagggcgac
gaaagcggcgtcgtcagccagtatgacaaggacgacgtcgaagcggtcggcctcgtgaag
ttcgactttttgggtctgaccacgctgacgattctcgactgggccgagcgctatatccgc
cgtctcgatccgtcgaagcaggactggtcgctcggccaggtgccgctcgacgaccccgcg
tcgttctcggtgctgaagaaagcgaatacggtcgccgtgttccagctggaaagccgcggc
atgcagggcatgctgaaagacgcgcagcccgaccgcttcgaggacatcatcgcgctcgtc
gcgttgtaccgtccgggcccgatggacctgatcccgagcttctgcgcgcgtaagcacggc
cgcgaagtggtcgagtatccggacccgcgcgtcgaatctgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggctattcgctg
ggcggcgccgacttgctgcgtcgcgcgatgggtaagaagaaggccgaggaaatggccgag
catcgcgagctgttccgccagggcgccgcgaagaatggcctgaccgccgagaaggccgac
gaaatcttcgacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggcc
gcgtatgcgctgctcgcgtactacaccgcgtggctgaaggcgcaccatccggcggaattc
atggcggcgaatatgtcgctcgccatggacgacaccgacaaggtcaagatcctgttcgaa
gactgtctgacgaacaagatggccgtgttgccgccggacgtgaatctgtccgcgtatcgc
ttcgagccggtcgccgaacccgacggcaagcgctcgaaaacgatccgttacggcctgggc
gcgatcaaaggcagcggccagaacgcgatcgaagaaatcctgcgcgcgcgcgaagaaggt
cctttcatcgacatcttcgatttctgcaaccgggttgatcgccgcatcgtcaatcgccgc
actatcgaggcgttgatccgcgcgggcgcgttcgataccttgcacgcgaatcgcgcgcaa
ctgattgcgtcggtttcgctcgcgatggaagcggccgagcaggcgagcgccaatgcattg
caggcgggtctgttcgacatgggtgacgcgccgtcgcaaggtcacgagctggtcgacgag
ccggaatggccggaaaagaagaagctgcaggaagagaaggccgcgctcggcttttacctg
tcgggccatctgttcgacgcgtacaaggatgaagtgcgccgcttcgtgcgccagaagatc
ggcgagttgaaggaggggcgcgacaagctggtcgccggggtgatcgcatcgctgcgcacg
cagatgacccagcgcggcaagatgctgatcgcgctgctcgacgacggcacgggccaatgc
gaagtcacggtgttcaacgagacctttgaagcgcacaagcagctgttcaaggaagacgaa
ctgctggtcgtgcaaggccaggcgcgtaacgacgcgttcaccggcggtatccgcttcacc
gtcgatacggtgatggatctgggccgcgcgcgttgccgctacgccgaagccgtgaaggtt
cagatgaacggtaatgccgacgcgctggcgttgcgccgtgtgctcgaagcgcatagcgcg
ggcaaggacgagcaggcggctgcggcgccagcggcttcatcgcgcggaggtggtggcggt
ggtggccgcaacggcggtggctatggcaacgaccgtcagcgtcaggcggtgcagattcca
aacggtctcgcggtgcaggtggtgtatcgcagcgagaatgcgcaaggtgaaatgcgtttg
ggcgacgcctggcgcgtgaagccgaccgacgaactgcttgccgcgttgcgcggcgagttt
gcgggaagctcgatcgagatcgtttattga
DBGET
integrated database retrieval system
