KEGG   Paraburkholderia ginsengisoli: I6I06_09680
Entry
I6I06_09680       CDS       T07246                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
pgis  Paraburkholderia ginsengisoli
Pathway
pgis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    I6I06_09680 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgis03400]
    I6I06_09680 (uvrA)
DNA repair and recombination proteins [BR:pgis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     I6I06_09680 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      I6I06_09680 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_23 BCA_ABC_TP_C DnaJ_CXXCXGXG nSTAND3 RsgA_GTPase AAA_22 AAA_21 AAA_25 Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: QQC62606
UniProt: A0A7T4MZT1
LinkDB
Position
1:2217413..2220286
AA seq 957 aa
MEQIRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYC
PDHEIPLEAQSVSQMVDAALALPEETKLMILAPVVANRKGEHVELFEEMQAQGFIRFRVR
SGGGTANEGVAKIYEVDSLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDKEKLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYEFDIDTAVEDLPEKVRKILLFGSG
KQEIPFSYINERGRTSVREHVFEGIIPNLERRYRETDSVAVREELAKYQNNQPCPACAGT
RLRREARFVRIGADGDARGIFEISGWPLRDALGYFQTLRLEGSKREIADKVVKEIVARLM
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
ATLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTPKQVQANAASMT
GQYMSGARNIEFPDERKAPDERRLRIVEAYGNNLQRVSLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVAHHLYGSATEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR
YNRETLDVQYKGKNISEVLDMTVEKAYEFFKPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAKSKASFTGKYLAPLLKRAASKK
NT seq 2874 nt   +upstreamnt  +downstreamnt
gtggaacaaatccgtattcgtggggctcgcacccacaacctgaagaacgtcaatctcgac
ttaccccgtcacaagctcgtcgtcattacgggcctttccggctcgggaaaatcgtcgctt
gcgttcgacacgctctatgcggaaggacagcggcgctacgtcgaaagtctctccgcctat
gcgcgccagttcctccagttaatggagaaaccggacgtcgatctgatcgaaggtttatcg
ccggcaatctcgatcgaacagaaagcgacctcgcacaatccgcgctccacggtcggcacc
gtcaccgagattcacgactatctgcgcctgctgttcgcgcgggtcggcacgccctattgc
cccgatcacgagatcccgctcgaagcgcaaagcgtgtcgcaaatggtcgacgcggcgctc
gcgttgccggaagaaacgaagctgatgatccttgcgcctgtggtggcaaaccgcaaaggc
gagcacgtcgagctgttcgaggaaatgcaggcgcagggcttcatccgttttcgcgtgcgc
tcgggcggcggcaccgccaacgaaggcgtcgcgaagatctatgaagtcgactcgctgccg
aagctgaagaagaacgacaagcacacgatcgacgtcgtcgtcgaccgtttgaaagtgcgt
ccggacatgaagcagcgtctcgcggaatcgttcgaaacggcgttgcgtctcgccgacggc
cgcgcgatcgcgctcgaaatggatacggacaaggagaagctgttcagctcgaagttcgcc
tgcccgatctgctcgtattcgctgcaggagctggagccgcgcctcttctcgttcaacaac
ccgatgggcgcctgcccggaatgcgacggcctcggccagatcactttcttcgatccgaag
cgggtggtcgcgcatccgtcgctgtcactcgcggcgggcgcggtgaagggctgggaccga
cgcaaccagttctacttccagatgctgcaaagtctcgcggcattctacgagttcgacatc
gacacggccgtcgaagatctgccggagaaggtccgcaagatcctgctgttcggttcgggc
aagcaggagattccgttctcgtatatcaacgagcgcggccgcacttcggtgcgcgagcat
gtgttcgaagggatcatcccgaatctggagcggcgttaccgcgagaccgactcggtcgcg
gtgcgcgaagagctcgccaagtatcagaacaaccagccgtgtccggcttgcgccggcacg
cgcttgcgccgcgaagcgcgcttcgtgcggattggcgcggacggcgacgcgcgcggcatc
ttcgaaatcagcggctggccgttgcgcgacgcgctcggctatttccagacgctgcggctg
gaaggctcgaagcgcgaaatcgccgacaaggtcgtgaaggagatcgtcgcgcggctgatg
ttcctgaataacgtcgggctcgattacctgtcgctcgaacgcagcgcggaaacgctgtcg
ggcggcgaagcgcagcgcattcgccttgcgtcgcagatcggctcgggcctcaccggcgtg
atgtacgtgctggacgaaccgtcgatcggcctgcatcagcgcgacaacgaccggctcatc
gctacgctcaaacatctgcgggatctcggcaactcggtgatcgtcgtcgagcacgacgag
gacatgatccgcatggccgactacgtggtcgacatgggtccgggcgccggcgaacatggc
ggcatggtgatcgccgagggcacgcccaaacaggtgcaggcgaacgcggcgtcgatgacc
gggcagtacatgtccggcgcgcgcaacatcgaattccccgacgaacgcaaggcgccggac
gagcggcgtctgcgtatcgtcgaggcatacggcaacaatctgcagcgcgtgtcgctggac
ctgccggtcgggctgctcacctgcgtgaccggtgtgtccggttcgggcaagtcgacgctg
atcaacgacacgctgtatcacgcagtcgcgcatcacctgtacggctcggccaccgagccg
gcgccgtacgaatcgatcgagggcctcgaacatttcgacaaggtcatcaacgtcgaccag
tcgccgatcggccgcacgccgcgctcgaacccggccacctacacgggcctcttcacgccg
atccgcgagctgttcgcgggcgtgcccgccgccaaggaacgcggctacgatccgggccgc
ttctcgttcaacgtgaagggcggccgctgcgaatcgtgtcaaggtgacggtgtgctcaag
gtggagatgcactttttgccggacgtgtacgtgccgtgcgatgtctgtcacggcaagcgc
tacaaccgcgaaacgctcgacgtccagtacaaaggcaagaacatcagcgaagtgctcgac
atgacggtggagaaagcctacgagttcttcaagcccgttccggtcgtcgcgcgcaagctg
aagaccttgctggacgtgggtctgggctatatccggctgggccagtcagccactacactg
tcgggcggcgaggcgcagcgcgtcaaactatctttggaactgagcaagcgtgatacgggt
cgcacgctatacatcctcgacgagccgactaccgggctgcactttcacgacatcgcgctg
ctgctggaagtgatccatcggttacgcgaccagggtaataccgtcgtgatcatcgagcat
aatctcgatgtaatcaaaaccgccgactgggtcatcgacctcggtcccgaaggcggtgcg
ggcggcgggcagatcatcgctcaaggcacgccggagcaggtggcgaagtcgaaggcaagt
tttaccggcaagtatctggcgccgctactcaagcgcgctgccagcaaaaagtaa

DBGET integrated database retrieval system