Paraburkholderia ginsengisoli: I6I06_09680
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Entry
I6I06_09680 CDS
T07246
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6I06_09680 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgis03400
]
I6I06_09680 (uvrA)
DNA repair and recombination proteins [BR:
pgis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6I06_09680 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6I06_09680 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_23
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND3
RsgA_GTPase
AAA_22
AAA_21
AAA_25
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
QQC62606
UniProt:
A0A7T4MZT1
LinkDB
All DBs
Position
1:2217413..2220286
Genome browser
AA seq
957 aa
AA seq
DB search
MEQIRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYC
PDHEIPLEAQSVSQMVDAALALPEETKLMILAPVVANRKGEHVELFEEMQAQGFIRFRVR
SGGGTANEGVAKIYEVDSLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDKEKLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYEFDIDTAVEDLPEKVRKILLFGSG
KQEIPFSYINERGRTSVREHVFEGIIPNLERRYRETDSVAVREELAKYQNNQPCPACAGT
RLRREARFVRIGADGDARGIFEISGWPLRDALGYFQTLRLEGSKREIADKVVKEIVARLM
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
ATLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTPKQVQANAASMT
GQYMSGARNIEFPDERKAPDERRLRIVEAYGNNLQRVSLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVAHHLYGSATEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR
YNRETLDVQYKGKNISEVLDMTVEKAYEFFKPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAKSKASFTGKYLAPLLKRAASKK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaaatccgtattcgtggggctcgcacccacaacctgaagaacgtcaatctcgac
ttaccccgtcacaagctcgtcgtcattacgggcctttccggctcgggaaaatcgtcgctt
gcgttcgacacgctctatgcggaaggacagcggcgctacgtcgaaagtctctccgcctat
gcgcgccagttcctccagttaatggagaaaccggacgtcgatctgatcgaaggtttatcg
ccggcaatctcgatcgaacagaaagcgacctcgcacaatccgcgctccacggtcggcacc
gtcaccgagattcacgactatctgcgcctgctgttcgcgcgggtcggcacgccctattgc
cccgatcacgagatcccgctcgaagcgcaaagcgtgtcgcaaatggtcgacgcggcgctc
gcgttgccggaagaaacgaagctgatgatccttgcgcctgtggtggcaaaccgcaaaggc
gagcacgtcgagctgttcgaggaaatgcaggcgcagggcttcatccgttttcgcgtgcgc
tcgggcggcggcaccgccaacgaaggcgtcgcgaagatctatgaagtcgactcgctgccg
aagctgaagaagaacgacaagcacacgatcgacgtcgtcgtcgaccgtttgaaagtgcgt
ccggacatgaagcagcgtctcgcggaatcgttcgaaacggcgttgcgtctcgccgacggc
cgcgcgatcgcgctcgaaatggatacggacaaggagaagctgttcagctcgaagttcgcc
tgcccgatctgctcgtattcgctgcaggagctggagccgcgcctcttctcgttcaacaac
ccgatgggcgcctgcccggaatgcgacggcctcggccagatcactttcttcgatccgaag
cgggtggtcgcgcatccgtcgctgtcactcgcggcgggcgcggtgaagggctgggaccga
cgcaaccagttctacttccagatgctgcaaagtctcgcggcattctacgagttcgacatc
gacacggccgtcgaagatctgccggagaaggtccgcaagatcctgctgttcggttcgggc
aagcaggagattccgttctcgtatatcaacgagcgcggccgcacttcggtgcgcgagcat
gtgttcgaagggatcatcccgaatctggagcggcgttaccgcgagaccgactcggtcgcg
gtgcgcgaagagctcgccaagtatcagaacaaccagccgtgtccggcttgcgccggcacg
cgcttgcgccgcgaagcgcgcttcgtgcggattggcgcggacggcgacgcgcgcggcatc
ttcgaaatcagcggctggccgttgcgcgacgcgctcggctatttccagacgctgcggctg
gaaggctcgaagcgcgaaatcgccgacaaggtcgtgaaggagatcgtcgcgcggctgatg
ttcctgaataacgtcgggctcgattacctgtcgctcgaacgcagcgcggaaacgctgtcg
ggcggcgaagcgcagcgcattcgccttgcgtcgcagatcggctcgggcctcaccggcgtg
atgtacgtgctggacgaaccgtcgatcggcctgcatcagcgcgacaacgaccggctcatc
gctacgctcaaacatctgcgggatctcggcaactcggtgatcgtcgtcgagcacgacgag
gacatgatccgcatggccgactacgtggtcgacatgggtccgggcgccggcgaacatggc
ggcatggtgatcgccgagggcacgcccaaacaggtgcaggcgaacgcggcgtcgatgacc
gggcagtacatgtccggcgcgcgcaacatcgaattccccgacgaacgcaaggcgccggac
gagcggcgtctgcgtatcgtcgaggcatacggcaacaatctgcagcgcgtgtcgctggac
ctgccggtcgggctgctcacctgcgtgaccggtgtgtccggttcgggcaagtcgacgctg
atcaacgacacgctgtatcacgcagtcgcgcatcacctgtacggctcggccaccgagccg
gcgccgtacgaatcgatcgagggcctcgaacatttcgacaaggtcatcaacgtcgaccag
tcgccgatcggccgcacgccgcgctcgaacccggccacctacacgggcctcttcacgccg
atccgcgagctgttcgcgggcgtgcccgccgccaaggaacgcggctacgatccgggccgc
ttctcgttcaacgtgaagggcggccgctgcgaatcgtgtcaaggtgacggtgtgctcaag
gtggagatgcactttttgccggacgtgtacgtgccgtgcgatgtctgtcacggcaagcgc
tacaaccgcgaaacgctcgacgtccagtacaaaggcaagaacatcagcgaagtgctcgac
atgacggtggagaaagcctacgagttcttcaagcccgttccggtcgtcgcgcgcaagctg
aagaccttgctggacgtgggtctgggctatatccggctgggccagtcagccactacactg
tcgggcggcgaggcgcagcgcgtcaaactatctttggaactgagcaagcgtgatacgggt
cgcacgctatacatcctcgacgagccgactaccgggctgcactttcacgacatcgcgctg
ctgctggaagtgatccatcggttacgcgaccagggtaataccgtcgtgatcatcgagcat
aatctcgatgtaatcaaaaccgccgactgggtcatcgacctcggtcccgaaggcggtgcg
ggcggcgggcagatcatcgctcaaggcacgccggagcaggtggcgaagtcgaaggcaagt
tttaccggcaagtatctggcgccgctactcaagcgcgctgccagcaaaaagtaa
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