Paraburkholderia ginsengisoli: I6I06_11225
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Entry
I6I06_11225 CDS
T07246
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pgis
Paraburkholderia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgis03009
]
I6I06_11225 (dbpA)
Enzymes [BR:
pgis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I6I06_11225 (dbpA)
Ribosome biogenesis [BR:
pgis03009
]
Prokaryotic type
rRNA helicases
I6I06_11225 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Cas3-like_C_2
P-loop_SecA
AAA_26
Motif
Other DBs
NCBI-ProteinID:
QQC62885
UniProt:
A0A7T4T7Y5
LinkDB
All DBs
Position
1:complement(2557595..2558998)
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AA seq
467 aa
AA seq
DB search
MNSPTTAGAPFSELSLPSATLANLTQLGYVEMTPIQAASLPIALAGHDLIAQAKTGSGKT
AAFSLALLSRLDARNFAVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRP
QTASLEHGAHIVVGTPGRIMDHLERGSLPLQALNTLVLDEADRMLDMGFFDDIATVVKQC
PKERQTLLFSATYPDGIVKLSQQFLRNPKEVKLAERHDNTKIRQRFYEVTEDGRLHAVGL
LLNHYRPVSTLAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFANRSCSV
LVATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVG
SLEQAQKREVEWHKLSELTAASNERLLPPMETLQILGGRKEKIRPGDVLGALTGEAGFAG
SQIGKINVTEMSTYVAVERSIARDALRKLSAGKVKGKKVKVRLMDDA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtcccaccaccgccggcgcgccgtttagcgagttgtcgctgccgagcgcgacc
ctcgcgaacctgacgcagctcggctacgtcgagatgacgccgattcaggccgcgagcctg
ccgatcgcgctcgccggccacgacctgattgcccaggcgaaaaccggcagcggcaagacc
gcggcgttttcgctcgcgctgctctcgcgcctcgacgcgcgcaacttcgccgtgcaggcg
atggtgctgtgccccacccgcgaactcgccgatcaggtcacgcaggaaatccgccgcctc
gcgcgcgcggaagaaaacatcaaggtgctgacgctgtgcggcggcacgccgatgcgcccg
caaacggcgagtctcgaacacggcgcacacatcgtggtcggcacgccgggccgcatcatg
gatcacctcgaacgcggcagcctgccgttgcaagcgctcaacacgctggtgctcgacgaa
gccgaccgcatgctcgacatgggtttcttcgacgacatcgcgaccgtcgtgaagcaatgc
ccgaaagagcggcaaacgctgctgttctcggcgacctaccccgacggtatcgtcaagctg
agccagcagttcctgcgcaatccgaaggaagtgaagctcgccgaacggcacgacaacacc
aagattcgccagcgcttctacgaagtgaccgaagacgggcgtctgcatgcggtcggtctg
ttgctgaaccactatcgtccggtcagcacgctcgcgttctgcaacaccaagcagcaatgc
cgcgatctgctcgacgtgctgcgcgcgcaaggttttcatgcgctcgcgctgcacggcgaa
ctcgatcagcgcgaacgcgatcaggtgctgatccagttcgcgaaccgcagctgctcggtg
ctggtcgccaccgacgtcgccgcgcgcggtctcgacatcgctcaactcgaagcggtgatc
aacgtcgacgtgacgccggacccggaagtgcatgtgcaccgtatcggccgcacgggccgc
gccgatcaggaaggctgggcgctgagcctcgcgagcatgaacgagatgggccgcgtgggc
agtctcgaacaggcacaaaagcgcgaagtcgaatggcacaagctgtccgaactcacggcg
gcgagcaacgagcggctgttgccgcctatggaaacgctgcagattctcggcggccgcaag
gaaaagatccgccccggcgacgtgctcggcgcgctgaccggcgaggcgggtttcgccggc
tcgcagatcggcaagatcaacgtgaccgaaatgtcgacctacgtggcggtggagcgcagc
atcgcgcgcgacgcgctgcgcaagctcagcgcgggcaaggtgaagggcaagaaggtcaag
gtccgtctgatggacgacgcgtga
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