Paraburkholderia ginsengisoli: I6I06_12075
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Entry
I6I06_12075 CDS
T07246
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis02020
Two-component system
pgis02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6I06_12075
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6I06_12075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgis03021
]
I6I06_12075
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pgis02035
]
I6I06_12075
Transcription machinery [BR:
pgis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6I06_12075
Bacterial motility proteins [BR:
pgis02035
]
Flagellar system
Flagellar assembly proteins
Stator
I6I06_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HopW1-1
MutS_III
MarR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QQC63046
UniProt:
A0A7T4N0M5
LinkDB
All DBs
Position
1:2756728..2757462
Genome browser
AA seq
244 aa
AA seq
DB search
MYNAQGKISQAEVLTKYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAAGRYKEDQ
GAQFETYASQRIRGAMLDELRSNDWLPRSLRRTSREVETAVHKVEQNLGRSASETEIAEH
LQMPLDEYQSMLQDLHGSQLIYYEDFDRSADDEPFLDRYCVDHSDPLSALLDDSLRSALV
EAIDRLPDREKLLMSLYYERGMNLREIGAVMEVSESRVCQLHSQAVARLRTRLREMAWAN
AEAN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcccagggaaagatttcccaagccgaagtcctgacgaagtacgcaccgctc
gtgcgtcgcctcggcttgcagctcgtcgccaagatgccggcgagcgtcgatctcgacgat
cttatccaggccggcatgatcggattgctggatgccgcgggccgctacaaggaagatcag
ggcgcgcagttcgagacctacgcgagccagcggattcgcggcgcgatgctcgacgagctg
cgcagcaacgactggttgccgcgtagcttgcggcgcacctcgcgcgaagtcgaaacggcg
gtgcacaaggtggaacagaacctgggccgctcggcgagcgagaccgaaattgccgagcac
ctgcaaatgccgctcgacgaatatcagtcgatgctgcaggacctgcacggcagccagttg
atctactacgaagacttcgaccgttccgccgacgacgaaccgttcctcgaccgctactgc
gtggatcattccgatccgctgtcagcgctactcgacgacagtctgcgctcggcgctggtg
gaggcgatcgaccgtttgccggatcgcgagaagctgctgatgtcgctgtactacgagcgc
ggcatgaatctgcgcgaaatcggcgcggtgatggaagtcagcgaatcgcgcgtgtgccag
ttgcacagccaggccgtggcgcgcctgcgcacgcggctgcgggaaatggcctgggcgaac
gccgaggcgaactga
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integrated database retrieval system
