Paraburkholderia ginsengisoli: I6I06_12390
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Entry
I6I06_12390 CDS
T07246
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pgis
Paraburkholderia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgis01011
]
I6I06_12390
Enzymes [BR:
pgis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
I6I06_12390
Peptidoglycan biosynthesis and degradation proteins [BR:
pgis01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
I6I06_12390
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Phe_ZIP
Motif
Other DBs
NCBI-ProteinID:
QQC63106
UniProt:
A0A7T4N0R7
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All DBs
Position
1:2821058..2823025
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AA seq
655 aa
AA seq
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MSKRIYRVYRAAGLALAAAALVACSTASAVKPIPLAQLTNDDQIFVQLREAARSNDAARA
AQLASMIPNYPAPSYLEYFQLKPQLFDSTGHARVDAPDAPVLAFLQKYDGQAIADRMRND
YLTVLGTRHDWRNFDQQYARFVLNDDTQVKCYALESRASRGENVADAARALLVDPKWYGD
GCVDLITVLGTNRQFSADDVWQQIRLAYEQNYTGTGSKLLDALGDQAPDPVLFGQATSTP
PLLLARGVGPDAQSHQLALLAITRMARNDPAMAAATFSSVAPSLNSPERAIGWGTIAYQA
AAKQMPSAVDWYRLSANAPLSNPAYEWRTRTALLAGDWNMVRWSIEQMPEALRKQPSWTY
WHARALKQAGDTTTANQEFESIAQGYNFYGQLAAEELGQKITVPPKTAVSDAEVQQAGST
PGFDLAQRFYALNLRLEGNREWNWPLRTMSDRQLLAAAEYARRIQLYDRTVNTADRTKSE
HDFSLRYLSPFRDIVERDAQSNGLDVEWAYGLIRQESRFIMNARSDVGASGLMQLMPGTA
QLVAKKIGLGPISREQMNDINTNILLGTNYLSMIYNQFDGSAVLATAGYNAGPGRPRNWR
QSLQRPVEGAIFAEAIPFQETRDYVKNVLSNTVYYAALFEGRPQSLKARLGYIAP
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgcatttatcgagtatatcgcgcggccggtctggcgctcgccgcggcggca
ctcgtcgcgtgcagcacggcctctgccgtcaagcccattccccttgcacaactcaccaac
gacgaccagattttcgtccagttgcgcgaggctgcccgcagtaacgacgcggcacgcgcg
gcgcaactcgcgagcatgatcccgaactatccggcgccttcgtatctggagtacttccag
ctcaagccgcaattgttcgattcgaccgggcatgcgcgcgtcgacgcgccggatgcgccg
gtgctcgcgttcctgcagaagtacgacggccaggcgattgccgaccgcatgcgcaacgac
tacctcacggtgctcggcacgcgtcacgactggcgtaacttcgaccagcaatatgcgcgc
ttcgtgctgaacgacgacacccaggtgaagtgctacgcgctcgaatcgcgtgcgtcgcgc
ggcgaaaacgttgccgatgcggcgcgtgcgctgctggtcgatccgaaatggtacggcgac
ggctgcgtcgatctgatcaccgtgctcggcacgaaccgccagttcagcgccgacgacgtc
tggcagcagatccgtcttgcgtacgaacagaactacaccggcacgggcagcaagctgctc
gacgcgctaggcgaccaggcaccggacccggtgttgttcggccaggcaaccagcacgccg
ccgttgctgctcgcgcgcggcgtcggtccagatgcgcagtcgcatcaactggcgctgctg
gcgatcacgcgtatggcgcgcaacgatccggcgatggctgcggccacgttctcgtcggtg
gcgccgtcgctgaattcgcccgagcgcgcgatcggctggggcacgattgcctatcaggcg
gccgccaagcagatgccgagcgcggtggactggtaccggctgtcggcgaacgctccgttg
tcgaatcccgcgtatgagtggcgcacccgcaccgcgctgctggccggcgactggaacatg
gtgcgctggtcgatcgaacagatgccggaggcattgcgcaagcagccgtcgtggacatac
tggcacgcgcgcgcgctgaagcaggccggcgacacgaccacggccaaccaggaattcgag
tcgatcgcgcagggctacaacttctacggtcaactggctgccgaggaactcggccagaag
atcacggtgccgccgaaaaccgcggtgagcgacgcggaagtgcagcaggccggcagcacg
ccgggcttcgatctggcgcagcgcttctatgcgctgaatctgcggctcgaaggcaatcgc
gaatggaactggccgctgcgcacgatgagcgaccggcaactgctcgcggccgccgaatac
gcacgccgtatccagctctatgaccgcaccgtcaacacggcggaccgcacgaagagcgag
cacgatttctcgctgcgctatctgtcgccgttccgcgatatcgtcgagcgcgatgcgcag
tcgaatgggctggatgtggaatgggcgtacgggctgattcgccaggagtcgcgcttcatc
atgaacgcgcgctcggacgtcggcgcgagcgggctgatgcaattgatgccgggcaccgcg
caactggtcgcgaaaaagatcggcctcggtccgatttcgcgcgagcagatgaacgacatc
aacacaaatatcctgctcggcaccaactacctgtcgatgatctacaatcagttcgacggg
tcggccgtgctggctaccgccggctataacgcaggcccgggccgtccgcgcaactggcgg
caatcgttgcagcgtccggtcgaaggcgcgatcttcgccgaggcgattccgttccaggaa
acccgcgactacgtgaagaacgtgctgtccaacacggtctactacgcggcgttgttcgaa
ggccgtccgcaatcgctgaaggcgcgtctgggttatatcgcgccgtaa
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