Paraburkholderia ginsengisoli: I6I06_13165
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Entry
I6I06_13165 CDS
T07246
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I06_13165 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgis03019
]
I6I06_13165 (recQ)
03400 DNA repair and recombination proteins [BR:
pgis03400
]
I6I06_13165 (recQ)
Enzymes [BR:
pgis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6I06_13165 (recQ)
Messenger RNA biogenesis [BR:
pgis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I06_13165 (recQ)
DNA repair and recombination proteins [BR:
pgis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6I06_13165 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQC63241
UniProt:
A0A7T4N109
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All DBs
Position
1:2984097..2985944
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AA seq
615 aa
AA seq
DB search
MSRPLEILNEVFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRREGGF
GTGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMATERALREGEIDLLYVAPER
LMTPRFQELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATAD
AITRDEIIHRLALDDARIFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHSRPDGTTDAG
VVYCLSRRKVEETAEWLKEKGMRALPYHAGMEFEIRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTGKLDALLGLCEAATCRRVRLLAYFGETSKPCGNCDNCLEPPATWDATREAQMA
LSCVFRAQRASGFNFGAGHLIDILRGNRSEKIMQRGHEKLTTFGIGAALGEPEWRAVFRQ
LVAFGYLTVDHEGFGSLVLTEASKPVLKSEQNVTMRRYVKPTRTRQSSGRTSERADPTIG
MGPRERARWERLRAWRTETAKSDGVPAYVIFHDATLAEIARNGPDSIEDLRGIPGMGARK
LDRFGDELLEVVAAD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgctcgaaatcctcaacgaagtcttcggttatcccgcgttcagagggcag
cagggcgaaattgtcgagcacgtcgccggcggtggcgactgcctcgtgctgatgccgacg
ggcggcggcaaatcgctgtgctatcagattccgtcgctggtgcggcgcgagggcggcttc
ggcacggggatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtggccgcgctc
acggaagtcggcgtgcgcgccgcgtatctgaattcgacgctgtcgagcgccgaggcaatg
gcgaccgagcgcgcgttgcgcgaaggcgagatcgatctgctttacgtcgcgccggaacgc
ttgatgacgccgcgtttccaggagttgctggagcgcacgcgcatcggcctgttcgcaatc
gacgaagcgcattgcgtatcgcagtggggccacgatttccggcccgaatatattcagctg
tcggtgctgcacgagcgctttccgaacgtgccgcgcatcgcgctcacagcgaccgcggac
gcgatcacgcgcgacgagatcatccaccgtctggcactcgacgacgcgcgcatcttcgtg
tcgagcttcgaccggccgaacatccgttatcgcatcgtcgaaaaggacaatgcgcgtgcg
cagttgctggacttcatccgtgccgagcattcgcggccggacggcactaccgacgccggc
gtggtctattgcctgtcgcgccgcaaggtggaagagaccgcggagtggctgaaggaaaag
ggcatgcgtgcgctgccgtaccacgccggcatggagttcgagattcgccagaagcatcag
gagatgttccagcgcgaggagggcatcgtgatgtgcgcgacgattgcgttcggcatgggt
atcgacaagccggatgtgcgcttcgtcgcgcacctggatttgccgaagagcgtcgagggc
tactatcaggaaaccggccgcgccggtcgcgacggcatgccggcgaacgcgtggatggcc
tacggtctcggcgacgtcgtgcagcagcgcaagatgatcgacgagtcggatgccgacgac
gcgcacaagcgcgtgcagaccggcaagctcgacgcgctgctcggtttgtgcgaggcagcg
acgtgtcggcgcgtgcggctgctcgcttatttcggcgagacgagcaagccgtgcggcaac
tgcgacaactgtcttgaaccgcccgccacctgggatgcgacgcgcgaggcgcagatggcg
ctgtcttgcgtgttccgcgcgcagcgggcgagcggtttcaacttcggcgccggccatctg
attgatattctgcgtggaaatcgcagcgagaagatcatgcagcgcggccacgagaagctc
accacgttcggcatcggcgcggcgctcggcgagccggagtggcgcgcggtgtttcgccag
cttgtggcattcggctatctgacggtcgatcacgaaggtttcggctcgctggtattaacc
gaagcaagcaagccggtgctcaagagcgagcaaaacgtgacgatgcgccgctacgtgaag
ccgacccgcacgcgtcagtcgtccggacgcacaagtgaacgtgccgatccgacaatcggc
atgggcccgcgcgaacgtgcccgctgggaacgcctgcgcgcctggcgtactgaaaccgcc
aagagcgacggcgtgccggcctacgtgatcttccacgatgcgacgctggccgaaattgcc
cgtaacggccccgattcgatcgaggatttgcgcggcattccgggcatgggcgcccgtaaa
ctcgaccgtttcggcgacgaattgctcgaagtcgtcgccgcggattga
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