Paraburkholderia ginsengisoli: I6I06_13380
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Entry
I6I06_13380 CDS
T07246
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00300
Lysine biosynthesis
pgis00470
D-Amino acid metabolism
pgis01100
Metabolic pathways
pgis01110
Biosynthesis of secondary metabolites
pgis01120
Microbial metabolism in diverse environments
pgis01230
Biosynthesis of amino acids
Module
pgis_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6I06_13380 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I6I06_13380 (lysA)
Enzymes [BR:
pgis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
I6I06_13380 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
QQC63283
UniProt:
A0A7T4N106
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All DBs
Position
1:complement(3016662..3017924)
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AA seq
420 aa
AA seq
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MTRSAFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTAAWNAYAGACAGRRASVHVA
VKANSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHADEMRDALAAG
VKCFNVESIPELDRLNAVAAEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDA
RATYQAAAAMANLDVVGIDCHIGSQITEVAPYLDAVDKVLELVEQIEQDGVKIRHIDVGG
GLGITYDDETPPEIGEFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRLEFLKPG
AEKNFAIVDAAMTDLARPAMYEAYHAIDPVVKRDVPAHVYDVVGPVCESGDWLGRERLLA
VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQAHVVRAREEVKQLFAGETILPV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatccgcatttgactacgtcgacggcgtattgcacgccgaaggcgtgtccgcc
gtctctctcgccgaacagttcggcacgccgctgtacgtgtattcgcgcgccgcgctcacc
gcagcgtggaacgcgtatgcgggtgcctgcgccggccgtcgcgcgagtgtgcacgtggcc
gtcaaggccaacagcaatctcgcggtgctgaacgtgttcgcgcgtctcggcgccggcttc
gacatcgtgtcgggcggcgaactggcgcgcgtgctggcggccggcggcaaagcggaaaac
actgtgttttccggcgtcggcaagcatgcggacgagatgcgcgacgcactcgcggccggc
gtcaagtgcttcaacgtcgaatcgattccggagctcgatcgcctgaacgcggtcgccgcc
gaaatgggcaagaaggcgccggtgtcgctgcgcgtgaatcccgatgtcgatgccaaaacg
catccgtatatttccaccgggctgaagtcgaacaagttcggcgttgccttcgaggacgcg
cgcgccacgtatcaggcagctgctgcgatggctaatctcgacgtggtcggcatcgactgc
catatcggctcgcagatcactgaagtcgcgccgtatctcgacgcggtcgacaaggtgctg
gaactggtagagcagatcgaacaggacggcgtgaagattcgccacatcgacgtgggcggc
ggtctcggcattacgtatgacgacgaaactccgccggagatcggcgagtttgtgcgcacc
gtgctcgatcgcatcgaagcgcgcggtcacggtcatcgcgaagtgtatttcgagccgggc
cgctcgctggtcggcaatgcgggcgtgctgctcacgcgcctcgagtttctgaagccgggc
gcggagaaaaacttcgccatcgtcgacgcggcgatgaccgatctcgcgcgccccgcgatg
tacgaggcgtatcacgcgatcgacccggtcgtgaagcgcgacgtgccggctcatgtgtac
gacgtggtcggcccggtctgcgaaagcggcgactggctcggccgcgaacgcctgctggcc
gtcgaaccgggcgatctgctggcgatccgctcggccggcgcttacggcttcgtgatgagc
tcgaactacaacacgcgcccgcgtgcggccgaggtgatggtcgatggtacacaggcgcat
gtggttcgcgcacgcgaagaggtcaagcagctgtttgcgggtgaaacgatcttgccggtg
taa
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