Paraburkholderia ginsengisoli: I6I06_14935
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Entry
I6I06_14935 CDS
T07246
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00020
Citrate cycle (TCA cycle)
pgis00640
Propanoate metabolism
pgis00660
C5-Branched dibasic acid metabolism
pgis00720
Other carbon fixation pathways
pgis01100
Metabolic pathways
pgis01110
Biosynthesis of secondary metabolites
pgis01120
Microbial metabolism in diverse environments
pgis01200
Carbon metabolism
Module
pgis_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgis_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
I6I06_14935 (sucD)
00640 Propanoate metabolism
I6I06_14935 (sucD)
00660 C5-Branched dibasic acid metabolism
I6I06_14935 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
I6I06_14935 (sucD)
Enzymes [BR:
pgis01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
I6I06_14935 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
DUF1611_N
Motif
Other DBs
NCBI-ProteinID:
QQC63574
UniProt:
A0A7T4T8E6
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All DBs
Position
1:3341650..3342531
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AA seq
293 aa
AA seq
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MSILINKDTKVITQGITGKTGQFHTRACREYANGREAYVAGVNPKKAGEDFEGIPIYASV
AEAKAETGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIELKARMRAKNS
KTLLLGPNCPGTITPDELKIGIMPGHIHRKGRIGVVSRSGTLTYEAVGQLTAIGLGQSSA
VGIGGDPINGLKHIDVMKMFNDDPDTDAVIMIGEIGGPDEANAAEWIKDNMKKPVVGFIA
GVTAPPGKRMGHAGALISGGADTAEAKLEIMEACGIKVTKNPSEMARLLKAML
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattctgattaacaaagacaccaaggtcatcacgcagggcatcaccggcaagacc
ggtcagttccacacgcgtgcttgccgtgaatatgcaaacggccgcgaagcgtacgttgca
ggcgtgaacccgaagaaggccggcgaagatttcgaaggcattcctatctacgcgagcgtc
gctgaagccaaggctgaaacgggcgcgaccgtgtcggtgatttacgttccgccggcaggc
gctgctgccgcaatctgggaagcggtcgaagccgacctggacctcgcaatctgtatcacg
gaaggcattcccgtccgtgacatgatcgagctcaaggcacgcatgcgcgcaaagaacagc
aagacgctgctgctcggaccgaactgcccgggcacgatcacgccggacgaactgaagatc
ggcatcatgccgggtcacatccaccgcaagggccgcatcggcgtcgtgtcgcgttcgggc
acgctgacgtatgaagcagtcggccagttgacggcgatcggcctcggccagtcgtcggcg
gtcggtatcggcggcgacccgatcaacggtctgaagcacatcgacgtgatgaagatgttc
aacgacgatccggatacggacgccgtcatcatgatcggcgaaatcggcggtccggacgaa
gcgaatgccgccgagtggatcaaggacaacatgaagaagccggtggtcggcttcatcgcc
ggcgtcacggcgcctccgggcaagcgcatgggccatgctggcgcgctgatctcgggcggt
gcggatacggctgaagcgaagctggaaatcatggaagcgtgcggcattaaagtcacgaag
aacccgtcggaaatggcgcgtcttctgaaggcgatgctgtaa
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